Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq115 262 5e-65 seq165 113 6e-20 >seq115 Length=88618 Score = 262 bits (290), Expect = 5e-65 Identities = 965/1496 (65%), Gaps = 43/1496 (3%) Strand=Plus/Minus Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 ||||| | | ||||||||| ||| ||||| | ||| ||||||| || |||||||| Sbjct 52532 TCACCAGACAAGGTTCTTCTAGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTG 52473 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 | ||| || ||||| | ||||| || ||||||||||| || | || | ||| | Sbjct 52472 TAACCTAAAATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTT 52413 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-- 110861 | ||| | | || | ||| | |||||||||| | | || ||| | Sbjct 52412 AAACCATGTTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCA--TAAGGTTGTTGGAG 52355 Query 110862 CACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTT 110921 || ||| ||| ||| | || | || ||||| || || || ||||| ||| | | Sbjct 52354 CAACTTTCCAATAGTCGTATTGTAATACACCTTGAGAGGCTGGTGAACCTTCATAAGAGG 52295 Query 110922 CATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGG 110981 | || | ||||| | ||||| ||||| || || | | |||||||| || | Sbjct 52294 CGTAAGGACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAG 52235 Query 110982 TTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACA 111041 |||||||||| || |||| | |||||| | || || ||||||| | ||| Sbjct 52234 TTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGTCAAATGGAACTCTTAACA 52175 Query 111042 AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG 111101 || || |||| || | |||||||||||| | |||| |||||||||| ||| || | Sbjct 52174 TCATGAAGGCATCAGCTAAACCTTGAACACCTAGTGCAATTGGTCTGTGTCTCATGTTGG 52115 Query 111102 ACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 111161 | ||| ||||| ||||| ||||| | ||||||||||| || || | ||| |||| Sbjct 52114 ATCTTCTAGCAGTTTCAACAGGATAGTAGTTTCTGTCAATAACAGCATTCAAATTCTTGG 52055 Query 111162 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTT------ 111215 || | || | ||||||||| |||| | ||| |||| |||| | || Sbjct 52054 CAATGACTTTACAAACTTCATGAAGCTTTTGGAAGTCATAAGTTTGAGTTTTTTGATCCT 51995 Query 111216 ------CATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269 | |||||| | ||| | ||| | || ||||| || || ||||| || || | Sbjct 51994 CAGCAACCTTGACAAAGGCTGGCAAGGCTACAGAGGCCAAGTTACAGACAGCAGTTTCCT 51935 Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329 | ||||| || || | |||||| ||||||||| || ||| || || ||||||| Sbjct 51934 TGTCATCTGAATATTCAACAATTTCACAACATAAGTTAGATGACTTGATAGTACCCAAAT 51875 Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389 ||||||| || || |||| || | ||||||||| | ||| | || || || || | Sbjct 51874 TCTTTTGATTGGATTTTCTGTTACATGAATCCTTGTAAACGATGAATGGAGTACCAGTTT 51815 Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT---TG 111445 | || || | || | || || | ||| ||| | | | || | |||| | || Sbjct 51814 CAGTTTGAGCTTCTAAGATGGCATACCATAACTTTTGAGCCTTG----ATGGTCTTTCTG 51759 Query 111446 GCCCGTCCCTCCGCCTCGTACTTTGT-GTAGAGGGCTTCAAACTCCTCACCCACCGCGTC 111504 | | ||| ||| || || || || || || ||||||||| || || | || Sbjct 51758 CCTCTTCCTTCCAATTCATA-TTGGTCATAAAGCTTTTCAAACTCATCGCCGTAAACATC 51700 Query 111505 GGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCC 111563 | ||| || | ||| || ||| |||| | | ||| | | || ||| || | Sbjct 51699 ACTCAAACCCGGAG-CTTCACTAGGAGAGAATAATGTCCAATCAGCATTGGCCTTGACTC 51641 Query 111564 GCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTT 111623 ||||||||| | ||||||||||| || | | || | ||||| | | |||| Sbjct 51640 TCTTCATGAACAAATCTGGAATCCAAAGAGCAGGGAATAAGTCTCTGGCTCTAATTTCTT 51581 Query 111624 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CA 111682 | | ||| || || || | |||| ||| || | |||||| | |||||| || | || Sbjct 51580 CTTTACCGTGATTCTTTCTGATATCAATGAAGTCAAAGATATCTGAGTGCCAAGGTTCCA 51521 Query 111683 AG-ATA----GACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737 || ||| | ||| | || ||| | ||| |||| | ||||| | || | Sbjct 51520 AGTATAAAGCAAATGCACCTGGTCTCTTGTTA---CCACCTTGGTCAACATATCTGGCGG 51464 Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797 || ||| || || | | ||| ||||| | ||||| ||| ||| || || || || Sbjct 51463 TGTTGTTGAAGACTCTGACCATAGGAATCAAACCATTTGAGGTACCGTTGGTACCAGCAA 51404 Query 111798 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 111857 | ||| | ||| ||| | | |||||||| | |||||||| ||||| || | Sbjct 51403 TGTAAGAACCAGTGGATCTGATGTTGTGGATGTGTAAACCAATACCACCAGCAGTTTTAG 51344 Query 111858 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 111917 ||||||| ||||| ||| | | ||| | |||||||| | || ||||| ||||| ||| Sbjct 51343 AGATTTGAGCACATTCCTTTAAAGTGTCGTAGATACCATCAATGGAGTCATCCTTCATGG 51284 Query 111918 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 111977 | | ||| || ||||| || |||||||| |||||||||||||| | || || | Sbjct 51283 ATACTAAGAAACAGGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAAAGTAGGAG 51224 Query 111978 TTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGT 112037 || || |||| | ||| |||||| || ||| || || | || ||||||| Sbjct 51223 AGGCATGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATAACTTTTTCAATGT 51164 Query 112038 CTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGA 112097 ||| |||||||| || | || || | ||||| || || || || |||| | | Sbjct 51163 TTTCACCGTGGATACCAACAGCAACTCTCATGATCAAGTGTTGAGGTCTTTCAACAATTT 51104 Query 112098 TGCCATCGAGCCGTTGA--AGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 112150 | || | || | || | |||| || |||| || | ||||||| |||||||||| Sbjct 51103 TACCGTTGATC--TTCAATAGATAAGATCTT-TCCAAAGTTTTGAAACCAAAGTAA 51051 >seq165 Length=247000 Score = 113 bits (124), Expect = 6e-20 Identities = 346/525 (66%), Gaps = 15/525 (3%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||| || |||| | |||| | |||||| ||||| | ||| Sbjct 137777 GCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCA 137718 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 ||||| | ||| |||||||||||| | || || ||| || || || |||||||||| Sbjct 137717 GGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCA-AAGGATCCTGAGAAGAAGAC 137659 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837 |||||| ||| || || |||| || | |||||| || || | ||| | | | Sbjct 137658 ACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGAT 137599 Query 122838 CCATTTCATTGCCCATTTCGCCTTCT-TCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 |||| | || ||||||| ||||| | | | | | || || | |||| ||||| | | Sbjct 137598 CCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCA-GGAATGGTTTCTATGGCATTGA 137540 Query 122897 ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 122956 |||| | ||||| ||||| |||||| |||| | ||| || ||||||| Sbjct 137539 ATAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTT 137480 Query 122957 CGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATC 123015 | |||| ||| ||| || | ||| | | ||||| | ||||| || Sbjct 137479 CTGAGTGAATGTTTTCCATCAT-GATTTGGAAACCATAGAAACACTTAGCTTCTGGAATT 137421 Query 123016 TGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 123075 ||||| ||| | | ||| || | | | |||||| ||||| ||||| || ||||| Sbjct 137420 TGAACTTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCA 137361 Query 123076 AAGAATGCCAGGA---TGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTC 123129 ||||| || | | || | | | |||| ||||||| || |||| | | ||| Sbjct 137360 AAGAAAGCTAATACTCTGGAAATAAAGAAT---CTTTCATTCTCGTTCATTCTGTTGTTC 137304 Query 123130 CAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174 ||||| | | |||||| || ||||||| |||||| || |||||| Sbjct 137303 CAGTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAA 137259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030367116800