Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq115 244 1e-59 seq68 95.1 1e-14 seq165 87.8 2e-12 >seq115 Length=88618 Score = 244 bits (270), Expect = 1e-59 Identities = 956/1488 (64%), Gaps = 29/1488 (2%) Strand=Plus/Minus Query 118158 TCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216 ||||| | | ||| | ||| ||| || || |||| ||| |||| || || || ||||| Sbjct 52532 TCACCAGACAAGGTTCTTCT-AGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 52474 Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTAC 118275 || ||| || ||||| | ||||| || || ||||| || || | | | |||| ||| | Sbjct 52473 GTAACCTAAAATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGA-GTTTC 52415 Query 118276 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTT--TGT 118333 | ||| | || ||| | ||| | | |||||||| | | || || || Sbjct 52414 TTAAACCATGTTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCA--TAAGGTTGTTGG 52357 Query 118334 CTCCCCCTGCCACATA-TCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 118392 | | | ||| ||| || | || | | |||||| || ||||| || || ||| | | Sbjct 52356 AGCAACTTTCCA-ATAGTCGTATTGTAATACACCTTGAGAGGCTGGTGAACCTTCATAAG 52298 Query 118393 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACA 118452 | || || || |||||||| || ||||| | || || | || |||||||| | Sbjct 52297 AGGCGTAAGGACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGA 52238 Query 118453 TTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 118512 | |||||||| || || |||| | |||||||| || || ||||| | | || Sbjct 52237 TAGTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGTCAAATGGAACTCTTA 52178 Query 118513 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 118572 ||| || || |||| || | |||||| ||||| || ||||||| | |||||||| | Sbjct 52177 ACATCATGAAGGCATCAGCTAAACCTTGAACACCTAGTGCAATTGGTCTGTGTCTCATGT 52118 Query 118573 TAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 118632 | || | | ||| || || || ||||| | || || || ||||| ||| | ||| | Sbjct 52117 TGGATCTTCTAGCAGTTTCAACAGGATAGTAGTTTCTGTCAATAACAGCATTCAAATTCT 52058 Query 118633 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT--- 118689 ||| | || || | |||||||||||||| | | ||| || | |||| | || Sbjct 52057 TGGCAATGACTTTACAAACTTCATGAAGCTTTTGGAAGTCATAAGTTTGAGTTTTTTGAT 51998 Query 118690 ---------CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCT 118740 | |||||| | || | ||| | || |||| ||||| |||| || | Sbjct 51997 CCTCAGCAACCTTGACAAAGGCTGGCAAGGCTACAGAGGCCAAGTTACAGACAGCAGTTT 51938 Query 118741 CATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCA 118800 | | | ||| | || || | |||||| || ||||| || ||| || || |||| Sbjct 51937 CCTTGTCATCTGAATATTCAACAATTTCACAACATAAGTTAGATGACTTGATAGTACCCA 51878 Query 118801 AGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCG 118860 | ||||||||||| || ||| ||||||| | ||||||||||| ||| |||| || || | Sbjct 51877 AATTCTTTTGATTGGATTTTCTGTTACATGAATCCTTGTAAACGATGAATGGAGTACCAG 51818 Query 118861 TCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGG 118920 | || ||||| | | | || || | ||| | | ||| | || || Sbjct 51817 TTTCAGTTTGAGCTTCTAAGATGGCATACCATAACTTTTGAGCCTTGATGGTCTTTCTGC 51758 Query 118921 CTCGCCCCTCTTCCTCGTACTTTGT-GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCT 118979 ||| || || || || || || || || ||||||||| || || | || Sbjct 51757 CTCTTCCTTCCAATTCATA-TTGGTCATAAAGCTTTTCAAACTCATCGCCGTAAACATCA 51699 Query 118980 GAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 119039 | || || || | | || |||| | | ||| | | || ||| || | | Sbjct 51698 CTCAAACCCGGAGCTTCACTAGGAGAGAATAATGTCCAATCAGCATTGGCCTTGACTCTC 51639 Query 119040 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 119099 |||||||| | ||||| ||||| || || | ||| | || | | | |||||| Sbjct 51638 TTCATGAACAAATCTGGAATCCAAAGAGCAGGGAATAAGTCTCTGGCTCTAATTTCTTCT 51579 Query 119100 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 119159 | || ||||| | | || | ||||| | |||||| | |||||| ||||||| | Sbjct 51578 TTACCGTGATTCTTTCTGATATCAATGAAGTCAAAGATATCTGAGTGCCAAGGTTCCAAG 51519 Query 119160 TACACCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCG 119216 || | || | || ||| | | |||| | |||| ||||| || || ||| | Sbjct 51518 TATAAAGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTG 51459 Query 119217 TTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGA 119276 || || || | | ||| ||||| | ||||| || || || || || ||| | Sbjct 51458 TTGAAGACTCTGACCATAGGAATCAAACCATTTGAGGTACCGTTGGTACCAGCAATGTAA 51399 Query 119277 GACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 119336 || | ||| ||||| | ||||||||| | ||||||||| || || || |||||| Sbjct 51398 GAACCAGTGGATCTGATGTTGTGGATGTGTAAACCAATACCACCAGCAGTTTTAGAGATT 51339 Query 119337 TGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 119396 || || || ||| | | | || ||||||| ||||| || |||||| |||| | | | Sbjct 51338 TGAGCACATTCCTTTAAAGTGTCGTAGATACCATCAATGGAGTCATCCTTCATGGATACT 51279 Query 119397 AGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCG 119456 | ||| ||| ||||||||||| || || |||||||| ||||| | ||| || | || Sbjct 51278 AAGAAACAGGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAAAGTAGGAGAGGCA 51219 Query 119457 TGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCC 119516 ||| |||| | ||| |||||| || ||| || || | || ||||| ||| Sbjct 51218 TGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATAACTTTTTCAATGTTTTCA 51159 Query 119517 CCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCA 119576 ||||| ||||| | | || | ||| | || || ||| ||| |||| | | |||| Sbjct 51158 CCGTGGATACCAACAGCAACTCTCATGATCAAGTGTTGAGGTCTTTCAACAATTTTACCG 51099 Query 119577 TCGAGCCTCTGGAGGTAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 | || | || || ||| |||| ||||| || |||| |||||| || Sbjct 51098 TTGATCTTCAATAGATAAGATCTT-TCCAAAGTTTTGAAACCAAAGTA 51052 >seq68 Length=101562 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 167937 CCAGTAGGTGTCTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATC 167996 ||||| || ||||||| | | || ||||||||||| | ||||| |||| |||||| Sbjct 18508 CCAGTTGGCACCTACGGTAGAATTGCTCCAAGATCTGGTTTAGCTGTCAAGAATGGTATA 18567 Query 167997 CAAGTTGGTGCGGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTC 168056 | ||||| ||||||||||| ||||||||| |||||||| ||||| || | || Sbjct 18568 TCAACAGGTGCAGGTGTTGTTGACAGAGACTATACTGGTGAAGTTAAAGTTGTATTATTT 18627 Query 168057 AATCACGGGCACACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTA 168116 ||||| | ||| || || || ||||| || ||| | | || ||| | |||||| Sbjct 18628 AATCATAGTGACAACGACTTTGAAGTCAAAGTTGGTGATAGAGTAGCCCAATTGATCTTA 18687 Query 168117 GA 168118 || Sbjct 18688 GA 18689 >seq165 Length=247000 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||| ||||| | | | || | |||||| ||||| || ||| Sbjct 137777 GCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCA 137718 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | ||| ||||||||||||||| || ||| ||| || || |||||||||| Sbjct 137717 GGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACA 137658 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 ||||| ||| ||||| |||| || | || ||||| Sbjct 137657 CCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAA 137620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433592068480