Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq115 111 2e-19 seq165 87.8 2e-12 >seq115 Length=88618 Score = 111 bits (122), Expect = 2e-19 Identities = 301/458 (66%), Gaps = 2/458 (0%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 ||| || ||| |||| ||| |||| ||||| || || ||| | || || | ||||| Sbjct 51180 TGAAACTTACAACTTGATGTCTCAAAGATACTTCACCCATGCCTCTCCTACTTTATTCAA 51239 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 |||||||| ||||| ||||| ||| ||| | || | |||||||||||||| Sbjct 51240 TGCTGGTACTCCAAGACCTCAAATGTCTTCCTGTTTCTTAGTATCCATGAAGGATGACTC 51299 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 || || || |||||||| || | ||||| ||||| || ||||| || | ||||| Sbjct 51300 CATTGATGGTATCTACGACACTTTAAAGGAATGTGCTCAAATCTCTAAAACTGCTGGTGG 51359 Query 53422 TATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 ||| ||| | ||| | ||| || | | | || | || || || ||||| Sbjct 51360 TATTGGTTTACACATCCACAACATCAGATCCACTGGTTCTTACATTGCTGGTACCAACGG 51419 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | |||| | | |||||| || | |||||||||||||| ||| | || || | Sbjct 51420 TACCTCAAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAACACCGCCAGATATGTTGA 51479 Query 53542 CCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 ||| |||||| ||| | | ||| | | || || | ||| | || || |||||| | | Sbjct 51480 CCAAGGTGGTAACAAGAGACCAGGTG-CATTTGCTTTATACTTGGAACCTTGGCACTCAG 51538 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660 | || | || || | || | | |||||| ||| | ||||| || | | | | Sbjct 51539 ATATCTTTGACTTCATTGATATCAGAAAGAATCACGGTAAAGAAGAAATTAGAGCCAGAG 51598 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 || | || | ||||| |||||||| || | |||||| Sbjct 51599 ACTTATTCCCTGCTCTTTGGATTCCAGATTTGTTCATG 51636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 55730 AAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCT 55789 ||||| | ||| ||| || |||||| | |||| |||| | ||||||||| |||| Sbjct 52663 AAGGACTTGTACAAGACCGTTTGGGAGCTATCACAAAAGACCATCATTGACATGGCTGCT 52722 Query 55790 GATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT---CTTCATGGAGAATCCT 55846 ||| | || | ||| || || || || || ||||||| | |||||| || Sbjct 52723 GATAGACAAGCCTTCATTGATCAATCACATTCCATGAACATTCACATCATGGCA---CCA 52779 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || ||| ||||||| || |||||||||||||| |||| || ||| | ||||| ||| Sbjct 52780 ACAATGGGTAAGTTGACTTCCATGCACTTTTACGGTTGGAGTAAAGGATTGAAGACTGGT 52839 Query 55907 ATGTACTA 55914 |||||||| Sbjct 52840 ATGTACTA 52847 >seq165 Length=247000 Score = 87.8 bits (96), Expect = 2e-12 Identities = 271/416 (65%), Gaps = 9/416 (2%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||| ||||||| || |||||||| || || | | |||||||| | || |||| Sbjct 137759 CCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAGGCATCAAACCTTTCTTC 137700 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||||||| ||||||||| ||||| || |||||||| || || ||| || || Sbjct 137699 TTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACACCCTCAACAGCAGCGAAA 137640 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTG--AGCCCAT 74942 || || || | || || ||| ||||| ||| ||||| |||| ||||||| Sbjct 137639 GCAACCAGTCTTTCGGCAAACAAGGCATC-CTTGTCTTGGATCCA--TCTGATAGCCCAT 137583 Query 74943 TCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCT 75002 || || ||| ||||| |||| | || || || || | ||| | | | || || Sbjct 137582 TCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAAAATTCGTTTTCC 137523 Query 75003 TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG 75062 | || ||||||| | |||| | || | ||||| || || || ||||| || Sbjct 137522 TTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTTCTGAGTGAATGTTTTCC 137463 Query 75063 TTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA 75122 | | ||| | | |||||| || || |||| ||| || || || |||||| Sbjct 137462 ATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAG 137403 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 ||| | | ||||| |||| || || || ||||| || || ||||| | ||| Sbjct 137402 TTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAGAAAGCTAATAC 137347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214577238400