Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq83 129 7e-25 seq100 116 4e-21 seq98 96.9 4e-15 >seq83 Length=232034 Score = 129 bits (142), Expect = 7e-25 Identities = 165/226 (73%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 27393 AAATATTA-CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTG 27451 |||||||| | | ||||||||| ||||| || || | ||||| || || || ||| | | Sbjct 217659 AAATATTAGCCACAATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAG 217600 Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511 | ||||| || |||| ||||| | | ||| ||||||| || || || || |||| Sbjct 217599 AAGTTGAATCCAGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAA 217540 Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 |||| || || || || | | |||||||||||||||||| | || |||| | | || Sbjct 217539 TTCCACCTGATCAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTT 217480 Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 || | ||||| || | ||||| ||||||||||| ||| |||| || Sbjct 217479 TATCTGACTACAACATTCAAAAAGAATCCACTCTCCATTTAGTTTT 217434 >seq100 Length=2196 Score = 116 bits (128), Expect = 4e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || || || || ||||| |||||| | ||||| || || Sbjct 1868 AATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 1809 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || | ||| | ||||||||||| || ||||| || || || || || || || Sbjct 1808 TGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAGCA 1749 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | |||| || |||||||||||| | || |||| | | || || | ||||| || Sbjct 1748 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 1689 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| || | ||| | || ||| Sbjct 1688 CATCCAAAAGGAATCAACATTACATTTGGTTTTG 1655 >seq98 Length=99416 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| | ||||| ||||| |||||| | || || || || || | ||| Sbjct 60556 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 60615 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | | | ||||| || || || |||||||| || ||||| || || || || | || Sbjct 60616 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 60675 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||||||||| | || |||| | | || | | ||||| || |||||||| Sbjct 60676 ATCTTCTCTGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAG 60735 Query 27595 GAATCCACTCTTCATCTAGTC 27615 ||||| || | ||| ||||| Sbjct 60736 GAATCAACATTGCATTTAGTC 60756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308917192960