Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq100 140 3e-28
seq83 107 2e-18
>seq100
Length=2196
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || |||||||| || || ||| | |||||| | || || ||| | ||
Sbjct 1867 ATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCT 1808
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| || || || | || || ||||| |||||||||||||| || ||||| || |||
Sbjct 1807 GATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAGCAA 1748
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||| | ||| || || ||||| ||||| || || | || || ||||||
Sbjct 1747 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 1688
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || ||||||||||||||| | || | |||||
Sbjct 1687 ATCCAAAAGGAATCAACATTACATTTGGTTTTGAGATTAAGAGGTGG 1641
>seq83
Length=232034
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| |||||| | ||||| || | || ||| | ||||| ||| |
Sbjct 217645 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCCAGT 217586
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||||| ||||| || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct 217585 GACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGATCAA 217526
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||||| ||||| || || | || || ||||||
Sbjct 217525 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 217466
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
|||||||| || || || | ||||| |||||
Sbjct 217465 ATTCAAAAAGAATCCACTCTCCATTTAGTTTT 217434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917269212160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |