Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq100 109 1e-18 seq98 104 5e-17 seq107 89.7 1e-12 >seq100 Length=2196 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||||||||| || || | | || || |||||||| | ||||| || Sbjct 1671 GTTGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 1730 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | | |||||| ||||| || | ||||| ||||| ||||| || || Sbjct 1731 GCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTA 1790 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||| | ||||| ||| ||||| | ||| || ||||| || || ||||| Sbjct 1791 ACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTT 1850 Query 211098 TTTACAAACACCTGCATTTT 211117 || || || | |||||||| Sbjct 1851 TTAACGAAAATTTGCATTTT 1870 >seq98 Length=99416 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||||||| | || | || || || ||||||||||| || || | | || || || Sbjct 60762 TCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 60703 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || | |||||| | | |||||| ||||| |||| |||||||| Sbjct 60702 ATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 60643 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || |||||||| || | ||| || || | ||| || Sbjct 60642 GTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAAT 60583 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | ||||| ||||| Sbjct 60582 GGTCTTACCGGTTAAGGTCTTGACAAA 60556 >seq107 Length=102065 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/181 (71%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 139803 TTGCCTT-CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTC 139861 ||| ||| ||||||||||| || ||||| || ||||| ||| || | |||| ||| | Sbjct 16625 TTGACTTACCAAAGAAGCATGGTAGAGGTGGTCAATCCGCTGTGAGATTTGCTAGATTGA 16684 Query 139862 GAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTA 139921 || | |||||||| ||||||||| | ||||| ||||| ||| || | || ||||| Sbjct 16685 GAGAAGAAAAGAGACACAACTACGTTAGAAAGGTTGCTGAGTGTGCTGTTCAAAATTTTA 16744 Query 139922 TCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981 ||| || ||||| | ||| ||| | ||| | || ||||| || || ||||| | Sbjct 16745 TCACCAACGACAAGGTTAATGTCAAGGGTTTAGTTCTAGCTGGTTCTGCTGATTTCAAAA 16804 Query 139982 C 139982 | Sbjct 16805 C 16805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148910859920