Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq98 156 1e-32 seq83 156 1e-32 seq100 145 2e-29 seq120 87.8 4e-12 >seq98 Length=99416 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | || | || ||||| ||||||| ||||| || | ||||||||| || Sbjct 60762 TCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 60703 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| |||| |||||| | || |||||| || || |||||||||||||| Sbjct 60702 ATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 60643 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||||| |||||||| || | | ||| || || || || || Sbjct 60642 GTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAAT 60583 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || || || Sbjct 60582 GGTCTTACCGGTTAAGGTCTT 60562 >seq83 Length=232034 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 |||||||||||||||||||| | ||||| || | |||||||| |||||||||| ||| Sbjct 217443 TGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGC 217502 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || || | || |||||| || || ||||| ||||| || |||||||| || Sbjct 217503 TTACCAGCAAAAATCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGGATTTTA 217562 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||||| || |||| ||| || ||| || ||||| ||||| || || || || Sbjct 217563 GACTTAACAGCATCAATGGAGTCACTGGATTCAACTTCTAAAGTGATGGTTTTACCGGTT 217622 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 |||||||| | || | ||||||| Sbjct 217623 AAAGTTTTAACAAAAATTTGCATT 217646 >seq100 Length=2196 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| ||||||| ||||| || | |||||||| |||||||||| ||||| ||| Sbjct 1671 GTTGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 1730 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | || |||||| || || || |||||||| ||||||||||| || ||| Sbjct 1731 GCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTA 1790 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| ||||| | || || | ||| || || || || || ||||| || || | |||| Sbjct 1791 ACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTT 1850 Query 225697 TTTATGAACACTTGCATTTT 225716 || | ||| | ||||||||| Sbjct 1851 TTAACGAAAATTTGCATTTT 1870 >seq120 Length=132652 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| |||||||||||||| || || || || || || || |||||||| ||||||||||| Sbjct 71443 GAAGATTTGACCATCAGTGATGGAAATGACGTTGGTTGGAATATAAGCGGAAACATCACC 71384 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580 |||| ||||| | || ||||| || || | || |||||||| || || Sbjct 71383 ACCTTGGGTTTCAATGACTGGTAAAGCAGTCATAGAACCACCACCCAACTT 71333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528021904352