Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq165 242 3e-59 >seq165 Length=247000 Score = 242 bits (268), Expect = 3e-59 Identities = 595/887 (67%), Gaps = 15/887 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || ||||||| |||||| ||||| || || || || ||| || |||||| Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGT-TTTTCACACTTTAGAGCTACAAG 4375 ||||| |||||||| ||||| ||| | || ||| | ||||| || || |||||| | Sbjct 138011 TCCATGAAATCAAATGGATTTGTTACATTA-AATATCTTTTCGCAACCTAAAGCTACTAA 137953 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAATTCCAATTA 4434 | || ||||| || ||||| | ||| || |||| | || ||| || || || | || Sbjct 137952 TAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCA-TTCATACCTAATA 137894 Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 || || || | || | | || | ||||| ||| || || ||||||| || Sbjct 137893 ATGCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCAATTTCAACTGCTTCTGAAATG 137835 Query 4494 ATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACG 4551 || ||||| | |||||| ||| || || || || | ||||| ||||| | Sbjct 137834 AT-TCTTTCAACA-ATCTTTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAACAAG 137777 Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611 |||| ||| || |||||||||||||||| ||| | ||| || || || || || || | Sbjct 137776 CAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAG 137717 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||| |||||| |||| || | ||| || || || ||||| || || || ||||| | | Sbjct 137716 GCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACAC 137657 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCC 4731 | || || || || || || || | || | ||| || | ||||||| |||| Sbjct 137656 CCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGATCC 137597 Query 4732 ATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT- 4790 || | | ||||| | || |||| || | ||||| || | ||| || || ||| Sbjct 137596 ATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAATA 137537 Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 || | | |||| | | ||||| | || || ||||| | | | || |||| Sbjct 137536 AAAATTCGTTTTCCTTA-GGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTTCT 137478 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 || || || ||||| || || || || || || || || ||||||||| | |||| Sbjct 137477 GAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGA 137418 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 ||||| |||| | || |||||||| || || || ||||| ||| ||| ||||| Sbjct 137417 ACTTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAG 137358 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGG 5027 || || || || || |||||| | ||| | || | | || ||||||| Sbjct 137357 AAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATTCTGTTGTTCCAGTCA 137298 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 | |||||||||| |||||||| ||||||| | |||||||| || ||||| ||| |||| Sbjct 137297 TGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCTTTTA 137238 Query 5088 TACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 || ||| || ||||| | | || || | || ||||||||| Sbjct 137237 TAAGCTTCCCAGATTTCAGGGAATTTGATTGGGAATAAGACAAATCT 137191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048517429264