Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 4e-12
>seq2
Length=1277918
Score = 87.8 bits (96), Expect = 4e-12
Identities = 175/256 (68%), Gaps = 8/256 (3%)
Strand=Plus/Minus
Query 230385 AATCATTACAGAAGCAGTTGAAAACGAAAAGG---AGTTCATTTGTGACGCTATTCCATG 230441
||||||| ||||||| ||||||| |||||| | |||||| || || |||||| |
Sbjct 605511 AATCATTTCAGAAGCTGTTGAAATYGAAAAGAGATACTTCATT---GATGCCATTCCA-G 605456
Query 230442 TCGCCTTATTGGC-ATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACC 230500
| ||||| |||| ||||| ||||| | ||| || ||| | |||||||| || ||
Sbjct 605455 TTGCCTTGTTGGGTATGAATGCTGACTTGATGAACCAATACGTTGAATTCGTTGCTGATA 605396
Query 230501 GCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTA 230560
| | || || || | |||| ||| || | | ||| || || || |||| || |
Sbjct 605395 GATTGTTAGTCGCCTTGGGTTGCGAAAAGATCTTCAATGTTACCAATCCATTTGACTTCA 605336
Query 230561 TGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATC 230620
|||| ||| || | || |||||||||||||| |||||| | || ||| || |
Sbjct 605335 TGGAAAACATATCCTTAGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTATCTGATTACC 605276
Query 230621 AGAGGCCTGGTGTGAT 230636
| | | | ||||| ||
Sbjct 605275 AAAAGGCAGGTGTTAT 605260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823769592710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |