Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 4e-12 >seq2 Length=1277918 Score = 87.8 bits (96), Expect = 4e-12 Identities = 175/256 (68%), Gaps = 8/256 (3%) Strand=Plus/Minus Query 230385 AATCATTACAGAAGCAGTTGAAAACGAAAAGG---AGTTCATTTGTGACGCTATTCCATG 230441 ||||||| ||||||| ||||||| |||||| | |||||| || || |||||| | Sbjct 605511 AATCATTTCAGAAGCTGTTGAAATYGAAAAGAGATACTTCATT---GATGCCATTCCA-G 605456 Query 230442 TCGCCTTATTGGC-ATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACC 230500 | ||||| |||| ||||| ||||| | ||| || ||| | |||||||| || || Sbjct 605455 TTGCCTTGTTGGGTATGAATGCTGACTTGATGAACCAATACGTTGAATTCGTTGCTGATA 605396 Query 230501 GCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTA 230560 | | || || || | |||| ||| || | | ||| || || || |||| || | Sbjct 605395 GATTGTTAGTCGCCTTGGGTTGCGAAAAGATCTTCAATGTTACCAATCCATTTGACTTCA 605336 Query 230561 TGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATC 230620 |||| ||| || | || |||||||||||||| |||||| | || ||| || | Sbjct 605335 TGGAAAACATATCCTTAGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTATCTGATTACC 605276 Query 230621 AGAGGCCTGGTGTGAT 230636 | | | | ||||| || Sbjct 605275 AAAAGGCAGGTGTTAT 605260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710