Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 168 7e-37 >seq2 Length=1277918 Score = 168 bits (186), Expect = 7e-37 Identities = 446/666 (67%), Gaps = 16/666 (2%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| || | ||||| || ||||| || || || ||| ||||| || | Sbjct 605273 TTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTTT 605332 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 ||||||| ||||| ||||| ||| | |||| || |||| | |||| || || | | Sbjct 605333 CCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCA-ACCCAAGG-CGACTAA 605390 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTC-GCAGTTCATTCCTAT-A 16849 |||||||| || || ||||| | |||||| ||| || || ||| ||||| || | | Sbjct 605391 CAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCA-TTCATACCCAACA 605449 Query 16850 AGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATA 16909 || | || |||| || || | || ||| | || || |||| ||||| ||| Sbjct 605450 AGGCA-ACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAAATG 605508 Query 16910 ATACTAGCAAC--TCGTTCC-TCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACAT 16966 || || |||| || || || | | ||| | || ||| || |||| || ||| Sbjct 605509 ATTCTYTCAACAATCTTTGGATCTGGCT-TGT-TCTTCAAG-TGRGAGAACAACAAACAG 605565 Query 16967 GCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCG 17026 || || || ||||| || |||||||||| ||| | ||||| || || ||||| || Sbjct 605566 GCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCA 605625 Query 17027 GGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATA 17086 |||||| ||| ||||| ||||| || || || || || || || || ||||| | | Sbjct 605626 GGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACA 605685 Query 17087 CCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATC 17146 ||||| || | || || || | | || ||| || || ||||| |||| | ||| Sbjct 605686 CCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATC 605745 Query 17147 CATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAAT 17206 ||| | |||| ||||| |||| ||| || | || ||||||||||| || ||| Sbjct 605746 CATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAAT 605805 Query 17207 AATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 || || ||||||| ||| ||| | || || || || | | || | ||| |||| Sbjct 605806 AAGAATTCGTTTTCCT-TAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTC 605864 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 ||||| ||||| ||||| || || || || || || || |||||| | ||||| Sbjct 605865 TGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTG 605924 Query 17326 AACTTC 17331 || || Sbjct 605925 RACYTC 605930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545490021560