Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 197 1e-45
>seq2
Length=1277918
Score = 197 bits (218), Expect = 1e-45
Identities = 482/725 (66%), Gaps = 8/725 (1%)
Strand=Plus/Plus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||||||| || | ||||| |||||||| || || || |||| ||||| ||||
Sbjct 605273 TTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTTT 605332
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
|||| || ||||| ||||| ||| | |||| || | || | |||| || ||||
Sbjct 605333 CCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCA-ACCCAAGGCGACTAAC 605391
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AA 16088
|||||||| || || ||||| | ||||| ||| ||||| ||| || || | ||
Sbjct 605392 -AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAA 605450
Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148
| | || |||| || | | || || | ||| || |||| |||||| |||||
Sbjct 605451 GGCA-ACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAAATGA 605509
Query 16149 TATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207
| || | | ||| | || | | || | ||| |||| | ||| ||
Sbjct 605510 T-TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTCAAGTGRGAGAACAACAAACAGGCA 605568
Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267
||||| |||| ||||||||||||| ||| | |||||||| || || || || |||
Sbjct 605569 AAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGC 605628
Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327
|| ||| ||||| |||||||| || ||||||||||| || || ||||| | ||||
Sbjct 605629 ATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCC 605688
Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387
||||||| || ||||| | | || ||| || || || || || | | ||||||
Sbjct 605689 TCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCAT 605748
Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAAT 16447
| |||||||||| |||| || || | || ||||||||||| || || ||
Sbjct 605749 CTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808
Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507
|| ||||||| | || | || || || || | || ||| ||| ||||||||
Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868
Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567
|| ||||| || || || || || || ||||| || || || | ||||| ||
Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928
Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627
|| | | || ||| ||| |||||| || || ||||| ||| |||||||| ||
Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988
Query 16628 GCCAA 16632
|||||
Sbjct 605989 GCCAA 605993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414291324440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |