Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 197 1e-45 >seq2 Length=1277918 Score = 197 bits (218), Expect = 1e-45 Identities = 482/725 (66%), Gaps = 8/725 (1%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||||||| || | ||||| |||||||| || || || |||| ||||| |||| Sbjct 605273 TTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTTT 605332 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 |||| || ||||| ||||| ||| | |||| || | || | |||| || |||| Sbjct 605333 CCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCA-ACCCAAGGCGACTAAC 605391 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AA 16088 |||||||| || || ||||| | ||||| ||| ||||| ||| || || | || Sbjct 605392 -AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAA 605450 Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148 | | || |||| || | | || || | ||| || |||| |||||| ||||| Sbjct 605451 GGCA-ACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAAATGA 605509 Query 16149 TATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207 | || | | ||| | || | | || | ||| |||| | ||| || Sbjct 605510 T-TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTCAAGTGRGAGAACAACAAACAGGCA 605568 Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267 ||||| |||| ||||||||||||| ||| | |||||||| || || || || ||| Sbjct 605569 AAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGC 605628 Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327 || ||| ||||| |||||||| || ||||||||||| || || ||||| | |||| Sbjct 605629 ATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCC 605688 Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387 ||||||| || ||||| | | || ||| || || || || || | | |||||| Sbjct 605689 TCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCAT 605748 Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAAT 16447 | |||||||||| |||| || || | || ||||||||||| || || || Sbjct 605749 CTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808 Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507 || ||||||| | || | || || || || | || ||| ||| |||||||| Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868 Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567 || ||||| || || || || || || ||||| || || || | ||||| || Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928 Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 || | | || ||| ||| |||||| || || ||||| ||| |||||||| || Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988 Query 16628 GCCAA 16632 ||||| Sbjct 605989 GCCAA 605993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414291324440