Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq11 268 1e-66 seq2 194 2e-44 >seq11 Length=1501259 Score = 268 bits (296), Expect = 1e-66 Identities = 1317/2079 (63%), Gaps = 56/2079 (3%) Strand=Plus/Minus Query 52804 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 ||||| |||||||||||| ||| || || | || || | | ||| ||||| || || | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922 | | || |||||| ||||| || ||||| || | || | ||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982 || ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 53041 ||||| |||||||| | | |||||||| ||| || || || || ||| || |||| | Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494 Query 53042 GGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCA 53098 || | ||||| || | || || || || | | || || | ||| || | Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434 Query 53099 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 53157 |||| ||| ||| | | || |||| | | | | | |||||||| | ||| | Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375 Query 53158 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 53217 ||| |||||||| ||| | | ||| || || || | ||||| | | | ||||| Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315 Query 53218 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 53277 | || | |||||| | ||| || ||||| ||||| || || || || || ||||| Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255 Query 53278 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 53335 | ||| ||| | | || || | |||| ||||| | ||| | | | || Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197 Query 53336 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 53395 |||| ||| | | ||| | || |||||| | || | Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137 Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455 | || | ||||| |||||||| ||| | || ||||| ||| ||| ||| || Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATA 718077 Query 53456 GTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTC-CAGGCTATCAAATGGATAATTTA 53513 ||||| ||||| | | || | | |||| ||| ||| | |||||||| | | Sbjct 718076 GTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGT--CAAATGGAACTCTCA 718019 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | | || || || || || | ||||||||||| | | | || ||||| |||||| | | Sbjct 718018 ACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGT 717959 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633 | || || ||| | || ||| || || || | || |||| ||| | ||| Sbjct 717958 TGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCT 717899 Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATTGTCCATCTATT--- 53689 || |||| ||||| ||||| | || || | |||||| || | | ||| || Sbjct 717898 TGGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGT 717839 Query 53690 ----ACAAACAT--------GTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 | |||| | | | ||| |||| ||| |||| ||||| || || | Sbjct 717838 CTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTT 717779 Query 53736 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 | || |||| | |||| | || ||| || | || | |||||||| || | Sbjct 717778 CMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCA 717719 Query 53796 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAG 53855 | || | ||| || ||| |||||||| | |||||| |||| ||||||||| ||||||| Sbjct 717718 AGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAG 717659 Query 53856 TTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGT 53915 ||||| | || | ||||| || || | ||| | | ||||| || | ||| | Sbjct 717658 TTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTC--TTTCT 717601 Query 53916 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973 |||| ||| || ||| | ||| | ||| || || || || || ||| Sbjct 717600 WCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATC 717541 Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 ||| || ||| |||| ||| | | ||| | ||| || | | |||| |||| Sbjct 717540 ACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCT 717481 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 54093 ||||| || | ||| ||||||||||| ||| |||| ||||||| ||| ||| || Sbjct 717480 CTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTC 717421 Query 54094 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 54153 || || |||||| | | || | ||| | | ||||| || ||||| |||||||| Sbjct 717420 TTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAA 717361 Query 54154 GTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 54213 ||| | || | | || || | ||||| || || ||||| | ||||| |||||||| Sbjct 717360 GTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTT 717301 Query 54214 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273 || | ||||| | ||| ||||| | ||||||||| | ||| ||||| || | || || Sbjct 717300 GTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTA 717241 Query 54274 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333 ||| ||| | || || || | ||| || || || || | || ||||| Sbjct 717240 AGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGAT 717181 Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TGTTAA 54392 | || ||| || || || || ||||| || || || || ||| ||| || || Sbjct 717180 TTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATAC 717121 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 || ||||| |||||||| | | ||| || ||||| || || || ||||| | Sbjct 717120 CAAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGG 717062 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTAT-ATCC 54511 |||| || || || ||| ||| | | ||||| || || || || ||| || | Sbjct 717061 CGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTT 717002 Query 54512 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571 || | ||||| || || || || | ||| | || ||| || ||||||||||||||||| Sbjct 717001 CACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTA 716943 Query 54572 TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 54631 ||| || |||| | || ||| ||||||| || || |||||||| |||||||| Sbjct 716942 CCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTG 716883 Query 54632 AAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 54691 ||||||| ||| | || || | | | || | ||||||| ||| | || | | Sbjct 716882 AAGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGAC-AGTT-- 716826 Query 54692 ATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 54746 | |||| || | ||||| || || || || ||| | || || |||| Sbjct 716825 -TCGTAA-ACGTCATCAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGT 716768 Query 54747 TAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGA 54804 | |||| || | || |||| | ||| ||||||| |||| ||||| || || ||| Sbjct 716767 TGTATAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGA 716708 Query 54805 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 | ||| ||||| || || |||| || ||||| ||||| Sbjct 716707 T--GGCAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671 >seq2 Length=1277918 Score = 194 bits (214), Expect = 2e-44 Identities = 579/887 (65%), Gaps = 18/887 (2%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||| || | ||||| || || || || ||||| |||| ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||| || |||||||||||||||| |||| ||| | ||||| | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 |||||||| || || || || | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 24024 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 |||||||| || || | ||| | |||| ||| || || || |||| || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 24083 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 24138 ||| || | | | | || | | | | | || || |||| |||||| | Sbjct 605511 ---TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGG 605566 Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198 | || || ||||| ||| |||||||| | || || |||||||| || || | || | Sbjct 605567 CAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAG 605626 Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258 |||| | || ||| || | ||| || || | ||||||||||| || ||||| | | Sbjct 605627 GCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACAC 605686 Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATGTATCC 24315 | || || || || || |||| |||||||| || | |||| |||| || |||| Sbjct 605687 CCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCC 605746 Query 24316 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 24374 | || || ||||| |||||||| | || | ||| || || ||||| ||||| || Sbjct 605747 ATCTGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAAT 605805 Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434 | | | ||||| ||| || || | ||||| || | ||| | || |||| Sbjct 605806 AAGAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCT 605865 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 || || |||||||| || ||||| || || |||||||| | || || | ||| || Sbjct 605866 GAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGR 605925 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 || || | | || ||| | || || || || || || || ||| ||| ||||| Sbjct 605926 ACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAG 605985 Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCA 24611 || ||||| || ||||| || |||||| | | | | || ||||| ||| Sbjct 605986 AAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCA 606045 Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671 | | ||| || || | ||| | |||||| ||||||| || || || || || | ||| Sbjct 606046 TGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTA 606105 Query 24672 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 || | ||| || ||| | | | ||||| || | |||||||| Sbjct 606106 TARGCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721473834160