Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
seq14 102 8e-17
>seq2
Length=1277918
Score = 111 bits (122), Expect = 2e-19
Identities = 290/443 (65%), Gaps = 6/443 (1%)
Strand=Plus/Minus
Query 116760 TGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTC 116819
||||||| || || ||| || || || ||||| ||||| |||| || |||| ||
Sbjct 605992 TGGCCTTCTTTGCTGCCTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTCTCTG 605933
Query 116820 AGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACG 116879
|| || || | | || || ||| ||||| || || || ||| ||||| |||
Sbjct 605932 CTGARGTYCAAATTCCAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACA 605873
Query 116880 TGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGA 116936
| ||||| |||| || || | | ||||| ||| | | | || ||| |
Sbjct 605872 TCCACTCAGAAACCTACTCCTTATTGTTGGACACATACATCAAGGACMCTAAGGAAAACG 605813
Query 116937 AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGG 116996
| || || || || ||||| || || || || |||| || |||||||| ||||
Sbjct 605812 AATTC---TTATTCAATGCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGG 605756
Query 116997 CGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGG 117056
| | | |||||| | || || ||| || | || | ||||| || ||||| |
Sbjct 605755 CCATCAGATGGATCCAAGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTG 605696
Query 117057 CCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCG 117116
| || ||||| |||||||| || || || || || || || ||| | ||||| |
Sbjct 605695 CTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAG 605636
Query 117117 GCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATT 117176
| | ||||| || |||| ||| ||||||| | |||| ||| ||||| ||| | ||
Sbjct 605635 GTTTGATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACA 605576
Query 117177 GCGACTTTGCCTGTTTGCTGTTC 117199
||||||||||||||| |||||
Sbjct 605575 CTGACTTTGCCTGTTTGTTGTTC 605553
>seq14
Length=450723
Score = 102 bits (112), Expect = 8e-17
Identities = 166/238 (70%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 40683 CCGA-AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741
|||| ||||||||||| ||||||||||| || || || || ||||| || | || ||||
Sbjct 422324 CCGACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCG 422265
Query 40742 AAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCG 40801
|| | | || | | | | | |||| ||||| | |||||||| || |||||
Sbjct 422264 AATCTTCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCAC 422205
Query 40802 CGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 40861
| || || ||| || | |||| ||| || || || | || |||| | || | |
Sbjct 422204 CTGAGCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTG 422145
Query 40862 ACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919
||||||||||||| ||||| |||| |||||| |||| ||| | || || || || ||
Sbjct 422144 ACTACAACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGGTGG 422087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219090515920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |