Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq16 138 2e-27 seq14 122 1e-22 seq1 107 3e-18 >seq16 Length=958289 Score = 138 bits (152), Expect = 2e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592 |||| ||||||||| ||| | || ||| |||| || || || || || |||| ||||| Sbjct 204162 AATATAATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTGAA 204221 Query 124593 GCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT 124652 | | ||| | ||| | | | || ||||| |||||||| |||||||| |||||| Sbjct 204222 TCTAGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCT 204281 Query 124653 GATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGAT 124712 ||||||||||| | || ||||| || || ||||| || || || |||| ||| || Sbjct 204282 GATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGAC 204341 Query 124713 TATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || || || ||||| |||||||| | ||||| ||||| | ||| |||||||| Sbjct 204342 TACAACATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGGT 204395 >seq14 Length=450723 Score = 122 bits (134), Expect = 1e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || ||||| || || || || ||| | ||| | ||| | Sbjct 422317 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 422258 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||| | || | | | || ||||| ||||| ||||||||||| |||||||| || Sbjct 422257 TGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAGCA 422198 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || || || || || |||||||| || || |||| ||| || || || Sbjct 422197 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTACAA 422138 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||| ||||| || ||||||| || || | ||| |||||||| ||| || Sbjct 422137 CATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGGTGGTAAGAA 422081 >seq1 Length=232064 Score = 107 bits (118), Expect = 3e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| || |||||||| ||||||||||||||||| | || || | || || Sbjct 90642 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTCTCTGGTAAG 90701 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| ||| | |||| || || || || || ||||| |||||||| |||||| Sbjct 90702 CAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAAGGAATCAACATTGCAT 90761 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || || | ||| |||||||| ||| Sbjct 90762 TTAGTCCTAAGATTAAGAGGTGGTGTTA 90789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455839465600