Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 1e-38
>seq2
Length=1277918
Score = 174 bits (192), Expect = 1e-38
Identities = 541/831 (65%), Gaps = 23/831 (3%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| ||||||||||||||||| || || || || |||| || || |||
Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061
||||| || ||||| ||||| | |||| | || || ||||| ||||| | | |
Sbjct 605332 TCCATGAAGTCAAATGGATTGGT--AACATTGAAGATCTTTTCGCAACCCAAGGCGACTA 605389
Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121
| |||||||| || || ||||| | || || ||||| || ||| ||||| || | |
Sbjct 605390 ACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACA 605449
Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC---AATGA 16178
| ||| || || || || | || | | ||||| || | ||| ||||| |||||
Sbjct 605450 AGGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAAATGA 605509
Query 16179 TTATATCTCTTACTACACTATTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATAC 16235
| ||| | ||| | ||| | | || ||| ||||| |||| | ||
Sbjct 605510 T------TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTCAAGTGRGAGAACAACAAAC 605563
Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295
| ||||| ||| || || |||||||| || | || |||||||| || || || | ||
Sbjct 605564 AGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAAC 605623
Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355
| ||||| | ||| || || | ||| || ||||| |||||||| || || ||||| |
Sbjct 605624 CAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGA 605683
Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415
||| ||||| || || || ||||||| || ||| | || | || || |
Sbjct 605684 CACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGA 605743
Query 16416 tccattttttagcccaatttg-ctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474
||||| | | ||||| | | ||||| || | ||| ||| | ||||| |||||
Sbjct 605744 TCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAG-GAATGGTTTCTATGGCATTG 605802
Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534
||||| | | ||||| || || || || || || | | ||| || ||
Sbjct 605803 AATAAGAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTT 605862
Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594
||||| || || || ||||| || || ||||| || || || | ||||| | |||
Sbjct 605863 TCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATT 605922
Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654
|| || |||| | || |||| | ||||| || || || || ||||| || |||
Sbjct 605923 TGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCA 605982
Query 16655 AAAAACG-CAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCA 16710
|| || | ||| | | |||||| | ||||||| || | | || |||
Sbjct 605983 AAGAAGGCCAAMACTCTR-GAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCA 606041
Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761
|||| ||||| || || ||||| | ||||| | ||||| ||||||||
Sbjct 606042 GTCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGC 606092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511901716200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |