Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 235 5e-57
>seq2
Length=1277918
Score = 235 bits (260), Expect = 5e-57
Identities = 578/870 (66%), Gaps = 15/870 (2%)
Strand=Plus/Plus
Query 13900 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13959
|||||| || ||||| || ||| ||||| |||||||||||||| || ||||| |
Sbjct 605259 AATAACACCTGCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 605318
Query 13960 CAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAAC 14018
| ||||| |||||||| || ||||||||||| || |||| || | || || ||||
Sbjct 605319 TAAGGATATGTTTTCCATGAAGTCAAATGGATTGGTA-ACATTGAAGATCTTTTCGCAAC 605377
Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078
| | | | || |||||||| |||| ||| |||| ||||| ||| || ||| ||
Sbjct 605378 CCAAGGCGACTAACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCAT 605437
Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138
||||||| | | || ||||| || | || || ||||| || ||||
Sbjct 605438 TCATACCCAACAAGGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAG 605497
Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 14198
| || || || | || ||| | || || | | || | | || | ||
Sbjct 605498 CTTCTGAAATGATTCTYTCAACAATCT--TTGGATCTGGCTTGTTCTTCAAGTGRGAGAA 605555
Query 14199 TTA--AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256
| |||| ||||| ||| || | || || ||||| | || | ||||| || ||
Sbjct 605556 CAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAA 605615
Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 14316
|| || || |||||||| ||| || || ||||| || || ||||| |||||||||||
Sbjct 605616 GGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGA 605675
Query 14317 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376
||||| | |||||||| ||||| || || | | || ||| ||||| || | ||
Sbjct 605676 GAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTT 605735
Query 14377 GTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAAT 14436
|| |||||| | | |||||||| | |||| || || | || ||||| ||
Sbjct 605736 GTCTTGGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTAT 605795
Query 14437 AGCATTAAATAAATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAG 14494
||||| ||||| ||| || || ||| || |||| |||||||| || | | ||||
Sbjct 605796 GGCATTGAATAAGAATTCGTTTTCCTTAGKGTCCTTG--ATGTATGTGTCCAACAATAAG 605853
Query 14495 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCT 14554
|| |||| ||||| ||||||||||| || || ||||| || ||||| | |||
Sbjct 605854 GAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCT 605913
Query 14555 TCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14613
|||| ||| || || | || |||| |||| |||| || || || || ||||||||
Sbjct 605914 TCTGGAATTTGRACYTCAGCAGAGAAAT-TTTCAACCAAGTTCTCRTTGACAATACCATC 605972
Query 14614 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAG 14670
| || ||||| || ||||| | | ||||||| | || | |||||| |
Sbjct 605973 AGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCT 606032
Query 14671 TTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730
|| ||||| || ||||||||| || | ||| | ||| ||| ||||||| ||| |||
Sbjct 606033 GTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGC 606092
Query 14731 AACAGCTTTTTTATACATTACCCATATTTC 14760
| ||| | ||||| | |||| |||||
Sbjct 606093 TTCGGCTCTCTTATARGCTTCCCAAATTTC 606122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345497501560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |