Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq16 120 2e-22 >seq16 Length=958289 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || ||||||||||| ||||| ||||||||||| | | ||| ||| ||||||||||| Sbjct 204370 TGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGC 204311 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| |||| | |||||||||||| || | ||||||||||| |||| Sbjct 204310 TTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTA 204251 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 ||| || ||| | ||||| | || ||| | ||||||| | || ||||| Sbjct 204250 GACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATGGTCTTACCGGTT 204191 Query 18303 AATGTTTTTACAAAAATTTGCATT 18326 |||||||| ||||||||||||||| Sbjct 204190 AATGTTTTAACAAAAATTTGCATT 204167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343921404665