Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq11 197 1e-45
seq2 145 7e-30
>seq11
Length=1501259
Score = 197 bits (218), Expect = 1e-45
Identities = 408/608 (67%), Gaps = 0/608 (0%)
Strand=Plus/Minus
Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411
|||| || | ||| || ||||| || || ||| | || | ||| | | || ||||
Sbjct 717478 TCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCTT 717419
Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471
| ||| ||||||| | | || | || || || | || | ||||| || || | ||
Sbjct 717418 TACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGT 717359
Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531
| | |||||| || || |||||||| || || || ||||| || || | ||| |||||||
Sbjct 717358 ACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGT 717299
Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591
|| | ||||| | ||| || | | ||| ||||| | ||| || || | |
Sbjct 717298 TGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAG 717239
Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651
|||| | | || | |||||| | ||| ||||| || || || | | || || ||
Sbjct 717238 AACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTT 717179
Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711
|| |||| |||| ||||||||||| || || ||| ||| || || | | ||||
Sbjct 717178 GAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACCA 717119
Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771
||||||| || |||||||| | | | || ||| |||| ||||| || || |||||
Sbjct 717118 AGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGT 717059
Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831
| || ||||||| | ||||| | ||||| || || ||| | || |||| || |
Sbjct 717058 GGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTCAC 716999
Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891
|||| ||||| | || || | ||| |||| || ||| ||||| || || | ||||
Sbjct 716998 CGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTACCGT 716939
Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951
| || || || ||||| || | || || || || || ||||| |||| ||||| ||||
Sbjct 716938 TGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTGAAGT 716879
Query 23952 CACGATCG 23959
| | ||||
Sbjct 716878 CTCTATCG 716871
>seq2
Length=1277918
Score = 145 bits (160), Expect = 7e-30
Identities = 398/610 (65%), Gaps = 11/610 (2%)
Strand=Plus/Minus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
||||||||| |||| || || | | || || |||||| | || || | || |||
Sbjct 606152 AGATTTGTCTTGTTCCCAATCAAGTTCCCTGAAATTTGGGAAGCYTATAAGAGAGCCGAA 606093
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || || ||||| | |||||| | || |||| |||||| | || ||| | |
Sbjct 606092 GCTTCTTTCTGGACAGCTGAAGAAATTGATTTGTCCAAGGATTTACATGACTGGAACAAC 606033
Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713
| || ||| || ||| |||||| || ||||| || || || || ||
Sbjct 606032 AGAATGAATGAAAACGAAAGATTCTTTATTTCYAGAGTKTTGGCCTTCTTTGCTGCCTCT 605973
Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773
||||||||||| || ||||| ||||| |||| || || || || ||| | | ||
Sbjct 605972 GATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTCTCTGCTGARGTYCAAATTCCAGAA 605913
Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833
|| | || || || || || ||| | || |||||| | || ||||||| || ||
Sbjct 605912 GCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACATCCACTCAGAAACCTACTCC 605853
Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAACGCGAT 57892
|| | | || || ||| | |||||| | | | ||||| | | | ||||| || ||
Sbjct 605852 TTATTGTTGGACACATACATCAAGGAC-MCTAAGGAAAACGAATTCTTATTCAATGCCAT 605794
Query 57893 CGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC 57952
||||| || || | ||| | ||||| || ||| | |||| |||||| || |
Sbjct 605793 AGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCCAA---GA 605737
Query 57953 CACG---GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009
|| | ||| ||| || || || || | || ||||| || || || ||| | |||||
Sbjct 605736 CAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTT 605677
Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069
|| || ||||| || || || ||| | ||||| || ||||||| || ||||
Sbjct 605676 CTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGAC 605617
Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129
|| |||||||||||| | | ||||| ||| | || ||||| ||||| || | |
Sbjct 605616 CTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTT 605557
Query 58130 GTACTCTCAC 58139
|| ||| |||
Sbjct 605556 GTTCTCYCAC 605547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766305274640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |