Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq11 197 1e-45 seq2 145 7e-30 >seq11 Length=1501259 Score = 197 bits (218), Expect = 1e-45 Identities = 408/608 (67%), Gaps = 0/608 (0%) Strand=Plus/Minus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || | ||| || ||||| || || ||| | || | ||| | | || |||| Sbjct 717478 TCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCTT 717419 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| ||||||| | | || | || || || | || | ||||| || || | || Sbjct 717418 TACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGT 717359 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||| || || |||||||| || || || ||||| || || | ||| ||||||| Sbjct 717358 ACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGT 717299 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 || | ||||| | ||| || | | ||| ||||| | ||| || || | | Sbjct 717298 TGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAG 717239 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 |||| | | || | |||||| | ||| ||||| || || || | | || || || Sbjct 717238 AACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTT 717179 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 || |||| |||| ||||||||||| || || ||| ||| || || | | |||| Sbjct 717178 GAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACCA 717119 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 ||||||| || |||||||| | | | || ||| |||| ||||| || || ||||| Sbjct 717118 AGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGT 717059 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || ||||||| | ||||| | ||||| || || ||| | || |||| || | Sbjct 717058 GGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTCAC 716999 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891 |||| ||||| | || || | ||| |||| || ||| ||||| || || | |||| Sbjct 716998 CGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTACCGT 716939 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | || || || ||||| || | || || || || || ||||| |||| ||||| |||| Sbjct 716938 TGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTGAAGT 716879 Query 23952 CACGATCG 23959 | | |||| Sbjct 716878 CTCTATCG 716871 >seq2 Length=1277918 Score = 145 bits (160), Expect = 7e-30 Identities = 398/610 (65%), Gaps = 11/610 (2%) Strand=Plus/Minus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||||||| |||| || || | | || || |||||| | || || | || ||| Sbjct 606152 AGATTTGTCTTGTTCCCAATCAAGTTCCCTGAAATTTGGGAAGCYTATAAGAGAGCCGAA 606093 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || || || ||||| | |||||| | || |||| |||||| | || ||| | | Sbjct 606092 GCTTCTTTCTGGACAGCTGAAGAAATTGATTTGTCCAAGGATTTACATGACTGGAACAAC 606033 Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713 | || ||| || ||| |||||| || ||||| || || || || || Sbjct 606032 AGAATGAATGAAAACGAAAGATTCTTTATTTCYAGAGTKTTGGCCTTCTTTGCTGCCTCT 605973 Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773 ||||||||||| || ||||| ||||| |||| || || || || ||| | | || Sbjct 605972 GATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTCTCTGCTGARGTYCAAATTCCAGAA 605913 Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833 || | || || || || || ||| | || |||||| | || ||||||| || || Sbjct 605912 GCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACATCCACTCAGAAACCTACTCC 605853 Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAACGCGAT 57892 || | | || || ||| | |||||| | | | ||||| | | | ||||| || || Sbjct 605852 TTATTGTTGGACACATACATCAAGGAC-MCTAAGGAAAACGAATTCTTATTCAATGCCAT 605794 Query 57893 CGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC 57952 ||||| || || | ||| | ||||| || ||| | |||| |||||| || | Sbjct 605793 AGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCCAA---GA 605737 Query 57953 CACG---GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009 || | ||| ||| || || || || | || ||||| || || || ||| | ||||| Sbjct 605736 CAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTT 605677 Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069 || || ||||| || || || ||| | ||||| || ||||||| || |||| Sbjct 605676 CTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGAC 605617 Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129 || |||||||||||| | | ||||| ||| | || ||||| ||||| || | | Sbjct 605616 CTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTT 605557 Query 58130 GTACTCTCAC 58139 || ||| ||| Sbjct 605556 GTTCTCYCAC 605547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766305274640