Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 129 1e-24 seq17 84.2 4e-11 >seq2 Length=1277918 Score = 129 bits (142), Expect = 1e-24 Identities = 340/513 (66%), Gaps = 18/513 (4%) Strand=Plus/Minus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCG 101908 |||||| | |||| | ||||| || | ||||| ||| ||| ||| || || Sbjct 605777 ATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCCAAGACAAGGACGCCCTGTTTGCT 605718 Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 ||| | | ||||| || ||||| ||||| || ||||||| || |||| || | Sbjct 605717 GAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCT 605658 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || |||||| | ||||| | ||| | |||||||| | |||| |||||| ||||| || Sbjct 605657 ATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGACCTTCTCCAACGAGTTGATC 605598 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTT 102088 | || ||||||||| | || |||||||| || || |||| | || Sbjct 605597 TGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCYCAC-------TT 605545 Query 102089 GATACCCCATCAAGAGA-AAGGATTCTTGAAATTGTCACT---GAAGCCGTCCGAATTGA 102144 || | | | ||| || |||| |||| | ||| | ||||| || ||| || Sbjct 605544 GAAGAACAAGCCAGATCCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAAATYGA 605485 Query 102145 ACAAGAATTTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCA-AGTTG 102202 | |||| | || || | | || | || ||| || |||| ||||| ||| | ||| Sbjct 605484 A-AAGAGATACTTCATTGATGCCATTCCAGTTGCCTTGTTGGGTATGAA-TGCTGACTTG 605427 Query 102203 ATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAG 102262 |||| ||| ||| ||||||| || || |||| | | || || | |||| |||||| Sbjct 605426 ATGAACCAATACGTTGAATTCGTTGCTGATAGATTGTTAGTCGCCTTGGGTTGCGAAAAG 605367 Query 102263 CACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACC 102322 || ||||||||||| || || |||||||| || || ||| | | ||||||| Sbjct 605366 ATCTTCAATGTTACCAATCCATTTGACTTCATGGAAAACATATCCTTAGCTGGTAAGACC 605307 Query 102323 AACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 ||||| |||||||||||||| | || || ||| Sbjct 605306 AACTTCTTTGAAAAGAGAGTATCTGATTACCAA 605274 >seq17 Length=1055512 Score = 84.2 bits (92), Expect = 4e-11 Identities = 203/303 (67%), Gaps = 7/303 (2%) Strand=Plus/Plus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCC---AAATGAGGTTCTCTCTT 35209 ||||||||||| ||||| || | |||||||||| || | || |||| ||||| | Sbjct 816428 GATAGAACTGGTACAGGCACATTGTCCATTTTTGCTCCTCCACAATTGAGATTCTCATTG 816487 Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269 ||||| ||| |||| | || || || || || ||||| | | || | | Sbjct 816488 AGAGACAACAAATTTCCTTTACTAACAACAAAAAAGGTTTTCACAAAGGCCATTATACTA 816547 Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCC--AAGAAGAAGA 35327 ||||| |||||||| | ||| | || || ||| |||| | |||||| | Sbjct 816548 GAACTACTATGGTTCATTAAGGGTGACACCAACAACAA-GAATCTACAGAAAGAAGGCGT 816606 Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387 || | |||||| | | |||||| || || || | | | || | || || ||||| Sbjct 816607 TAAA-ATCTGGGATGGTAATGGTTCCCGTGAGTATCTAGATTCTCTTGGATTGACCGATA 816665 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 ||| || || ||| |||| || || ||||| ||||||||| | || ||||||||||| | Sbjct 816666 GAGAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGAGT 816725 Query 35448 ATG 35450 ||| Sbjct 816726 ATG 816728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583784456235