Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 1e-24
seq17 84.2 4e-11
>seq2
Length=1277918
Score = 129 bits (142), Expect = 1e-24
Identities = 340/513 (66%), Gaps = 18/513 (4%)
Strand=Plus/Minus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCG 101908
|||||| | |||| | ||||| || | ||||| ||| ||| ||| || ||
Sbjct 605777 ATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCCAAGACAAGGACGCCCTGTTTGCT 605718
Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968
||| | | ||||| || ||||| ||||| || ||||||| || |||| || |
Sbjct 605717 GAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCT 605658
Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028
|| |||||| | ||||| | ||| | |||||||| | |||| |||||| ||||| ||
Sbjct 605657 ATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTGACCTTCTCCAACGAGTTGATC 605598
Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTT 102088
| || ||||||||| | || |||||||| || || |||| | ||
Sbjct 605597 TGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCYCAC-------TT 605545
Query 102089 GATACCCCATCAAGAGA-AAGGATTCTTGAAATTGTCACT---GAAGCCGTCCGAATTGA 102144
|| | | | ||| || |||| |||| | ||| | ||||| || ||| ||
Sbjct 605544 GAAGAACAAGCCAGATCCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAAATYGA 605485
Query 102145 ACAAGAATTTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCA-AGTTG 102202
| |||| | || || | | || | || ||| || |||| ||||| ||| | |||
Sbjct 605484 A-AAGAGATACTTCATTGATGCCATTCCAGTTGCCTTGTTGGGTATGAA-TGCTGACTTG 605427
Query 102203 ATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAG 102262
|||| ||| ||| ||||||| || || |||| | | || || | |||| ||||||
Sbjct 605426 ATGAACCAATACGTTGAATTCGTTGCTGATAGATTGTTAGTCGCCTTGGGTTGCGAAAAG 605367
Query 102263 CACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACC 102322
|| ||||||||||| || || |||||||| || || ||| | | |||||||
Sbjct 605366 ATCTTCAATGTTACCAATCCATTTGACTTCATGGAAAACATATCCTTAGCTGGTAAGACC 605307
Query 102323 AACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
||||| |||||||||||||| | || || |||
Sbjct 605306 AACTTCTTTGAAAAGAGAGTATCTGATTACCAA 605274
>seq17
Length=1055512
Score = 84.2 bits (92), Expect = 4e-11
Identities = 203/303 (67%), Gaps = 7/303 (2%)
Strand=Plus/Plus
Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCC---AAATGAGGTTCTCTCTT 35209
||||||||||| ||||| || | |||||||||| || | || |||| ||||| |
Sbjct 816428 GATAGAACTGGTACAGGCACATTGTCCATTTTTGCTCCTCCACAATTGAGATTCTCATTG 816487
Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269
||||| ||| |||| | || || || || || ||||| | | || | |
Sbjct 816488 AGAGACAACAAATTTCCTTTACTAACAACAAAAAAGGTTTTCACAAAGGCCATTATACTA 816547
Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCC--AAGAAGAAGA 35327
||||| |||||||| | ||| | || || ||| |||| | |||||| |
Sbjct 816548 GAACTACTATGGTTCATTAAGGGTGACACCAACAACAA-GAATCTACAGAAAGAAGGCGT 816606
Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387
|| | |||||| | | |||||| || || || | | | || | || || |||||
Sbjct 816607 TAAA-ATCTGGGATGGTAATGGTTCCCGTGAGTATCTAGATTCTCTTGGATTGACCGATA 816665
Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447
||| || || ||| |||| || || ||||| ||||||||| | || ||||||||||| |
Sbjct 816666 GAGAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGAGT 816725
Query 35448 ATG 35450
|||
Sbjct 816726 ATG 816728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583784456235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |