Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq11 320 2e-82 seq2 219 5e-52 >seq11 Length=1501259 Score = 320 bits (354), Expect = 2e-82 Identities = 1327/2079 (64%), Gaps = 56/2079 (3%) Strand=Plus/Minus Query 62042 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62100 ||||| |||||||||||| ||| || || | || || | | ||| ||||| || || | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 62101 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62160 | | || |||||| ||||| || ||||| || | || | ||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 62161 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62220 || ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 62221 TTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62279 ||||| |||||||| | | |||||||| ||| || || || || ||| || |||| | Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494 Query 62280 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCA 62336 || | ||||| || | || ||||| || | | || || | ||| || | Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434 Query 62337 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAA 62395 |||| ||| ||| | | || |||| | | | | | || ||||| | |||| | Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375 Query 62396 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATT 62455 ||| |||||||| ||| | | ||| || || || | ||||| | | ||||| Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315 Query 62456 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62515 | || | |||||| | ||| || ||||| ||||| || || || || || ||||| Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255 Query 62516 AAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGT 62573 | ||| ||| | | || || | |||| | ||||| | ||| | | | || Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197 Query 62574 ACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62633 |||| ||||| | | ||| | || |||||| | || | Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137 Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATGCACCGTAATAA 62690 |||| | ||||| |||||||| || || || || ||||| ||| ||| ||| Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAA---GCTTCTAAAGCAGCGTGATAG 718080 Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGAT-CTTGTGCTT--CCGGGCTATCAAATGGATAA 62747 || ||||||||||| | | || | | |||| ||| | | | ||||||||| Sbjct 718079 ATAGTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAG---TCAAATGGAACT 718023 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 | || | || || || || || | ||||||||||| | | | || ||||| |||||| Sbjct 718022 CTCAACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTC 717963 Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867 | || || || ||| | || ||| || || || | || |||| ||| | Sbjct 717962 ATGTTGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAG 717903 Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCATCTAT 62926 || || |||| ||||| ||||| | || || | |||||| || ||| | Sbjct 717902 TTCTTGGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTT 717843 Query 62927 T-------ACAAACAT--------GTT--CAATGCAACAGATGCCAGATTACACACGGCT 62969 | | |||| | | | ||| |||||||| |||| ||||| || || Sbjct 717842 TGGTCTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCA 717783 Query 62970 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 63029 || || |||| | |||| | || ||| || | || | ||||| || Sbjct 717782 GTTTCMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTA 717723 Query 63030 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63089 || || || | ||| || ||| |||||||| | |||||| |||| ||||||||||||| Sbjct 717722 CCCAAGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTA 717663 Query 63090 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 63149 ||||||||| | || | ||||| || || | ||| | | | ||||| || | | Sbjct 717662 CCAGTTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTCTTT 717603 Query 63150 TTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63209 | ||| | ||| || ||| || ||| | |||||| || || || || || Sbjct 717602 CTWCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCA 717543 Query 63210 TTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63269 | ||| | ||| |||| ||| | | ||| | ||| || | | |||| ||| Sbjct 717542 TCACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACT 717483 Query 63270 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCC 63329 | ||||| || | ||| ||||||||||| ||| |||| ||||| | ||| ||| Sbjct 717482 CTCTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCT 717423 Query 63330 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63389 || || || |||||| | | || | ||| | | ||||| || ||||| |||||| Sbjct 717422 TCTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCC 717363 Query 63390 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63449 ||||| | ||| | | || || | ||||| || || ||||| | ||||| |||||| Sbjct 717362 AAGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTG 717303 Query 63450 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63509 || || | ||||| | ||| ||||| | ||| || || |||| |||||||| | || Sbjct 717302 TTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATG 717243 Query 63510 TAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63569 || ||| ||| | || || || | ||| || || || || | || ||| Sbjct 717242 TAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAG 717183 Query 63570 ATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCA-TGTT 63628 ||| || ||| || || ||||| ||||| || || ||| || || ||| || | Sbjct 717182 ATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGAT 717123 Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688 | || ||||| |||||||| | | | ||| || ||||| || || || ||||| Sbjct 717122 ACCAAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGA 717064 Query 63689 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-AT 63747 ||||| || || || ||| ||| | | ||||| || ||||| || ||| || | Sbjct 717063 GGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTT 717004 Query 63748 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTT 63807 || | ||||| || || || || | ||| | || ||| || ||||||||||| || | Sbjct 717003 TTCACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCT 716945 Query 63808 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 63867 | ||| || ||||| | || ||| ||||||| || || |||||||| |||||||| Sbjct 716944 TACCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGT 716885 Query 63868 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATAT 63927 ||||||| ||| | || || | | || || | ||||||| ||| | || | | Sbjct 716884 TGAAGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGACAGTTT 716825 Query 63928 CCATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63982 | |||| || | ||||| || || || || ||| | ||||| || Sbjct 716824 C----GTAA-ACGTCATCAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTA 716770 Query 63983 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 64042 |||| |||| || || || |||| | ||| ||||||| |||| |||||| || || Sbjct 716769 GTTGTATAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACT 716710 Query 64043 TATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 ||||| |||||||| || |||| || ||||| ||||| Sbjct 716709 GATGGCAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671 >seq2 Length=1277918 Score = 219 bits (242), Expect = 5e-52 Identities = 582/884 (66%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||| || | ||||| || || || || || || | || ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| ||||| ||||||||||||||| | || |||| | ||||| | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 |||||||| || |||||||| | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 |||||||| || || | ||| | |||| ||| || || || | || || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 33530 AAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588 ||| | | | | || | | | | | || || |||| |||||| || | Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTTCTTC-AAGTGRGAGAACAACAAACAGGCAA 605569 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 | || ||| | ||| |||||||| | || || ||||| || || || | || |||| Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | || ||| || | ||| || || | ||| ||||||||||| ||||||| || | Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCA-C 33764 | || ||||| || |||| ||||| || || | |||| |||| || ||||| | Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATC 605749 Query 33765 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33824 | || ||||| |||||||| | || | ||| || |||||||||||||| || | Sbjct 605750 TGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808 Query 33825 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33884 | | ||||| ||| || || | || || || | ||| | || |||| || Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868 Query 33885 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 33944 || |||||||| || || || || || |||||||| | || || | ||| || || Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928 Query 33945 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAC 34004 || | | | || ||| | || || || || || || |||||| ||| ||||| || Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988 Query 34005 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 34061 ||||| || ||||| || |||||| | | | | || ||||| |||| Sbjct 605989 GCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATGT 606048 Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121 | ||| || || | ||| | |||||| ||||||| || || || || || | ||||| Sbjct 606049 AAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATAR 606108 Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 | ||| || ||| | | | ||||||||| | |||||||| Sbjct 606109 GCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817466163760