Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq11 302 6e-77
seq2 199 5e-46
>seq11
Length=1501259
Score = 302 bits (334), Expect = 6e-77
Identities = 1324/2079 (64%), Gaps = 56/2079 (3%)
Strand=Plus/Minus
Query 64835 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
||||| |||||||||||| ||| || || | || || | | ||| ||||| || || |
Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||||| ||||| || ||||| || | || | ||| |
Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
|| ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| |
Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072
||||| |||||||| | | |||||||| ||| || || || || ||| || |||| |
Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494
Query 65073 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 65129
|| | ||||| || | || ||||| || | || || || | ||| || |
Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434
Query 65130 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 65188
|||| ||| ||| | | || |||| | | | | | |||||||| | ||| |
Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375
Query 65189 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 65248
||| |||||||| ||| | | ||| || || || | ||||| | | | |||||
Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315
Query 65249 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 65308
| || | |||||| | ||| || ||||| ||||| || || || || || |||||
Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255
Query 65309 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 65366
| ||| ||| | | || || | |||| ||||| | ||| | | | ||
Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197
Query 65367 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 65426
|||| ||| | | ||| | || |||||| | || |
Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137
Query 65427 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 65486
| || | ||||| |||||||| ||| | || ||||| ||| ||| ||| ||
Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATA 718077
Query 65487 GTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTC-CAGGCTATCAAATGGATAATTTA 65544
||||| ||||| | | || | | |||| ||| ||| | |||||||| | |
Sbjct 718076 GTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGT--CAAATGGAACTCTCA 718019
Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604
| | || || || || || | ||||||||||| | | | || ||||| |||||| | |
Sbjct 718018 ACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGT 717959
Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664
| || || ||| | || ||| || || || | || |||| ||| | ||
Sbjct 717958 TGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCT 717899
Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCA-TCTATT--- 65720
|| |||| ||||| ||||| | || || | |||||| | | ||| ||
Sbjct 717898 TGGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGT 717839
Query 65721 ----ACAAACAT--------GTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766
| |||| | | | ||| |||||||| |||| ||||| || || |
Sbjct 717838 CTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTT 717779
Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826
| || |||| | |||| | || ||| || | || | |||||||| || |
Sbjct 717778 CMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCA 717719
Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886
| || | ||| || ||| |||||||| | |||||| |||| |||||||||||||||||
Sbjct 717718 AGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAG 717659
Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 65946
||||| | || | ||||| || || | ||| | | | ||||| || | ||| |
Sbjct 717658 TTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTC--TTTCT 717601
Query 65947 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004
|||| ||| || ||| | ||| | |||||| || || || || |||
Sbjct 717600 WCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATC 717541
Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064
||| || ||| |||| ||| | | ||| | ||| || | | |||| ||||
Sbjct 717540 ACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCT 717481
Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124
||||| || | ||| ||||||||||| ||| ||||| ||||||| ||| ||| ||
Sbjct 717480 CTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTC 717421
Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184
|| || |||||| | | || | ||| | | ||||| | ||||| ||||||||
Sbjct 717420 TTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAA 717361
Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244
||| | ||| | | || || | ||||| || || ||||| | ||||| ||||||||
Sbjct 717360 GTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTT 717301
Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304
|| | ||||| | ||| ||||| | ||||||||| ||||| ||||| || | || ||
Sbjct 717300 GTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTA 717241
Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364
||| | | | || || || | ||| || || || || | || |||||
Sbjct 717240 AGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGAT 717181
Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TGTTAA 66423
| || ||| || || || || ||||| || || || || ||| ||| || ||
Sbjct 717180 TTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATAC 717121
Query 66424 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 66483
|| ||||| |||||||| | | ||| || ||||| || || || ||||| |
Sbjct 717120 CAAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGG 717062
Query 66484 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCC 66542
|||| || || || ||| ||| | | ||||| || ||||| || ||| || |
Sbjct 717061 CGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTT 717002
Query 66543 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602
|| | ||||| || || || || | ||| | || ||| || |||||||||||||||||
Sbjct 717001 CACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTA 716943
Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 66662
||| || ||||| | || ||| ||||||| || || |||||||| ||||||||
Sbjct 716942 CCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTG 716883
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722
||||||| ||| | || || | | | || | ||||||| ||| | || | |
Sbjct 716882 AAGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGAC-AGTT-- 716826
Query 66723 ATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 66777
| |||| || | ||||| || || || || ||| | || || ||||
Sbjct 716825 -TCGTAA-ACGTCATCAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGT 716768
Query 66778 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGA 66835
|| |||| || || || |||| | ||| ||||||| |||| ||||| || || |||
Sbjct 716767 TGTATAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGA 716708
Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
| ||| ||||| || || | || || ||||| |||||
Sbjct 716707 T--GGCAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671
>seq2
Length=1277918
Score = 199 bits (220), Expect = 5e-46
Identities = 579/885 (65%), Gaps = 14/885 (2%)
Strand=Plus/Plus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| ||| || | ||||| || || || || ||||| |||| ||||| |||
Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
|||||||| || ||||||||| ||||||| | || |||| | ||||| | | |
Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046
|||||||| || || ||||| | ||| ||||||| ||| |||||| || | |
Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451
Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105
|||||||| || || | ||| | |||| ||| || || || |||| || ||
Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510
Query 36106 AGATATTACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164
|| | | | | || | | | | | || || |||| |||||| || |
Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGGCAA 605569
Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224
| || ||||| ||| |||||||| | || || |||||||| || || | || ||||
Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629
Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284
| | || ||| || | ||| || || | ||||||||||| || ||||| | || |
Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689
Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCACTGTCATGTATCCA- 36339
| || || || || |||| ||||| || || ||| || | |||| || |||||
Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCA-AACAGGGCGTCCTTGTCTTGGATCCAT 605748
Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399
|| || ||||| |||||||| | || | ||| || || ||||| ||||| || |
Sbjct 605749 CTGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAA 605807
Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 36459
| | ||||| ||| || || | ||||| || | ||| | || |||| ||
Sbjct 605808 GAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGA 605867
Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519
|| |||||||| || ||||| || || |||||||| | || || | ||| || ||
Sbjct 605868 GTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRAC 605927
Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579
|| | | | || ||| | || || || || || || || ||| ||| ||||| ||
Sbjct 605928 YTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAA 605987
Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATT 36636
||||| || ||||| || |||||||| | | | || ||||| ||||
Sbjct 605988 GGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATG 606047
Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696
| ||| || || | ||| | |||||| ||||||| || || || || || | |||||
Sbjct 606048 TAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATA 606107
Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741
| ||| || ||| | | | ||||| || | ||||||||
Sbjct 606108 RGCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172660138280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |