Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq11 302 6e-77 seq2 199 5e-46 >seq11 Length=1501259 Score = 302 bits (334), Expect = 6e-77 Identities = 1324/2079 (64%), Gaps = 56/2079 (3%) Strand=Plus/Minus Query 64835 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 ||||| |||||||||||| ||| || || | || || | | ||| ||||| || || | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 | | || |||||| ||||| || ||||| || | || | ||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 || ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072 ||||| |||||||| | | |||||||| ||| || || || || ||| || |||| | Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494 Query 65073 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 65129 || | ||||| || | || ||||| || | || || || | ||| || | Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434 Query 65130 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 65188 |||| ||| ||| | | || |||| | | | | | |||||||| | ||| | Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375 Query 65189 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 65248 ||| |||||||| ||| | | ||| || || || | ||||| | | | ||||| Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315 Query 65249 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 65308 | || | |||||| | ||| || ||||| ||||| || || || || || ||||| Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255 Query 65309 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 65366 | ||| ||| | | || || | |||| ||||| | ||| | | | || Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197 Query 65367 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 65426 |||| ||| | | ||| | || |||||| | || | Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137 Query 65427 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 65486 | || | ||||| |||||||| ||| | || ||||| ||| ||| ||| || Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATA 718077 Query 65487 GTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTC-CAGGCTATCAAATGGATAATTTA 65544 ||||| ||||| | | || | | |||| ||| ||| | |||||||| | | Sbjct 718076 GTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGT--CAAATGGAACTCTCA 718019 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | | || || || || || | ||||||||||| | | | || ||||| |||||| | | Sbjct 718018 ACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGT 717959 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 | || || ||| | || ||| || || || | || |||| ||| | || Sbjct 717958 TGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCT 717899 Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCA-TCTATT--- 65720 || |||| ||||| ||||| | || || | |||||| | | ||| || Sbjct 717898 TGGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGT 717839 Query 65721 ----ACAAACAT--------GTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766 | |||| | | | ||| |||||||| |||| ||||| || || | Sbjct 717838 CTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTT 717779 Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826 | || |||| | |||| | || ||| || | || | |||||||| || | Sbjct 717778 CMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCA 717719 Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886 | || | ||| || ||| |||||||| | |||||| |||| ||||||||||||||||| Sbjct 717718 AGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAG 717659 Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 65946 ||||| | || | ||||| || || | ||| | | | ||||| || | ||| | Sbjct 717658 TTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTC--TTTCT 717601 Query 65947 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004 |||| ||| || ||| | ||| | |||||| || || || || ||| Sbjct 717600 WCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATC 717541 Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064 ||| || ||| |||| ||| | | ||| | ||| || | | |||| |||| Sbjct 717540 ACTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCT 717481 Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124 ||||| || | ||| ||||||||||| ||| ||||| ||||||| ||| ||| || Sbjct 717480 CTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTC 717421 Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184 || || |||||| | | || | ||| | | ||||| | ||||| |||||||| Sbjct 717420 TTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAA 717361 Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244 ||| | ||| | | || || | ||||| || || ||||| | ||||| |||||||| Sbjct 717360 GTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTT 717301 Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304 || | ||||| | ||| ||||| | ||||||||| ||||| ||||| || | || || Sbjct 717300 GTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTA 717241 Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364 ||| | | | || || || | ||| || || || || | || ||||| Sbjct 717240 AGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGAT 717181 Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TGTTAA 66423 | || ||| || || || || ||||| || || || || ||| ||| || || Sbjct 717180 TTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATAC 717121 Query 66424 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 66483 || ||||| |||||||| | | ||| || ||||| || || || ||||| | Sbjct 717120 CAAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGG 717062 Query 66484 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCC 66542 |||| || || || ||| ||| | | ||||| || ||||| || ||| || | Sbjct 717061 CGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTT 717002 Query 66543 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 || | ||||| || || || || | ||| | || ||| || ||||||||||||||||| Sbjct 717001 CACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTA 716943 Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 66662 ||| || ||||| | || ||| ||||||| || || |||||||| |||||||| Sbjct 716942 CCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTG 716883 Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722 ||||||| ||| | || || | | | || | ||||||| ||| | || | | Sbjct 716882 AAGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGAC-AGTT-- 716826 Query 66723 ATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 66777 | |||| || | ||||| || || || || ||| | || || |||| Sbjct 716825 -TCGTAA-ACGTCATCAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGT 716768 Query 66778 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGA 66835 || |||| || || || |||| | ||| ||||||| |||| ||||| || || ||| Sbjct 716767 TGTATAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGA 716708 Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 | ||| ||||| || || | || || ||||| ||||| Sbjct 716707 T--GGCAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671 >seq2 Length=1277918 Score = 199 bits (220), Expect = 5e-46 Identities = 579/885 (65%), Gaps = 14/885 (2%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||| || | ||||| || || || || ||||| |||| ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 |||||||| || ||||||||| ||||||| | || |||| | ||||| | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 |||||||| || || ||||| | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 |||||||| || || | ||| | |||| ||| || || || |||| || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 36106 AGATATTACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 || | | | | || | | | | | || || |||| |||||| || | Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGGCAA 605569 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | || ||||| ||| |||||||| | || || |||||||| || || | || |||| Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | | || ||| || | ||| || || | ||||||||||| || ||||| | || | Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCACTGTCATGTATCCA- 36339 | || || || || |||| ||||| || || ||| || | |||| || ||||| Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCA-AACAGGGCGTCCTTGTCTTGGATCCAT 605748 Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399 || || ||||| |||||||| | || | ||| || || ||||| ||||| || | Sbjct 605749 CTGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAA 605807 Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 36459 | | ||||| ||| || || | ||||| || | ||| | || |||| || Sbjct 605808 GAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGA 605867 Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519 || |||||||| || ||||| || || |||||||| | || || | ||| || || Sbjct 605868 GTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRAC 605927 Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579 || | | | || ||| | || || || || || || || ||| ||| ||||| || Sbjct 605928 YTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAA 605987 Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATT 36636 ||||| || ||||| || |||||||| | | | || ||||| |||| Sbjct 605988 GGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATG 606047 Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696 | ||| || || | ||| | |||||| ||||||| || || || || || | ||||| Sbjct 606048 TAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATA 606107 Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741 | ||| || ||| | | | ||||| || | |||||||| Sbjct 606108 RGCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172660138280