Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq2 145 5e-30
>seq2
Length=1277918
Score = 145 bits (160), Expect = 5e-30
Identities = 283/415 (68%), Gaps = 8/415 (2%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCT- 22808
|| || || |||||||| || ||| | || || || |||||||| || || |||||| |
Sbjct 605705 GCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTR 605646
Query 22809 --GAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGAC 22866
||||||| ||| | ||||| || ||| | || |||||||||||||| || | |||
Sbjct 605645 AAGAAGAAAGGTTTG---ATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTGCAGAGAC 605589
Query 22867 GAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGT 22926
|||||| ||||| ||||||||| ||| || |||| || || ||||| || |
Sbjct 605588 GAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCYCACTTGAAGAACAAGCCAGAT 605529
Query 22927 CAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986
| | || | |||||| || || || ||||| || || | | | ||||
Sbjct 605528 CCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAAATYGAAAAGAGATACTTCATT 605469
Query 22987 GA-GGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACA 23045
|| | || | || || | | ||||||||| |||| |||| | ||| | |
Sbjct 605468 GATGCCATTCCAG-TTGCCTTGTTGGGTATGAATGCTGACTTGATGAACCAATACGTTGA 605410
Query 23046 GTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAA 23105
|| ||||| ||| | || | | ||| |||||| | |||||| | || ||| ||||
Sbjct 605409 ATTCGTTGCTGATAGATTGTTAGTCGCCTTGGGTTGCGAAAAGATCTTCAATGTTACCAA 605350
Query 23106 TCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
||||||||| |||||||| ||||| | | | ||||| || ||||||||||||
Sbjct 605349 TCCATTTGACTTCATGGAAAACATATCCTTAGCTGGTAAGACCAACTTCTTTGAA 605295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233526192851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |