Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 145 5e-30 >seq2 Length=1277918 Score = 145 bits (160), Expect = 5e-30 Identities = 283/415 (68%), Gaps = 8/415 (2%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCT- 22808 || || || |||||||| || ||| | || || || |||||||| || || |||||| | Sbjct 605705 GCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTR 605646 Query 22809 --GAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGAC 22866 ||||||| ||| | ||||| || ||| | || |||||||||||||| || | ||| Sbjct 605645 AAGAAGAAAGGTTTG---ATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTGCAGAGAC 605589 Query 22867 GAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGT 22926 |||||| ||||| ||||||||| ||| || |||| || || ||||| || | Sbjct 605588 GAAGGTTTACACACTGACTTTGCCTGTTTGTTGTTCTCYCACTTGAAGAACAAGCCAGAT 605529 Query 22927 CAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986 | | || | |||||| || || || ||||| || || | | | |||| Sbjct 605528 CCAAAGATTGTTGARAGAATCATTTCAGAAGCTGTTGAAATYGAAAAGAGATACTTCATT 605469 Query 22987 GA-GGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACA 23045 || | || | || || | | ||||||||| |||| |||| | ||| | | Sbjct 605468 GATGCCATTCCAG-TTGCCTTGTTGGGTATGAATGCTGACTTGATGAACCAATACGTTGA 605410 Query 23046 GTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAA 23105 || ||||| ||| | || | | ||| |||||| | |||||| | || ||| |||| Sbjct 605409 ATTCGTTGCTGATAGATTGTTAGTCGCCTTGGGTTGCGAAAAGATCTTCAATGTTACCAA 605350 Query 23106 TCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 ||||||||| |||||||| ||||| | | | ||||| || |||||||||||| Sbjct 605349 TCCATTTGACTTCATGGAAAACATATCCTTAGCTGGTAAGACCAACTTCTTTGAA 605295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233526192851