Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq11 369 5e-97 seq2 201 2e-46 >seq11 Length=1501259 Score = 369 bits (408), Expect = 5e-97 Identities = 1338/2075 (64%), Gaps = 48/2075 (2%) Strand=Plus/Minus Query 78714 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 ||||| |||||||||||| ||| || || | || || | | ||| ||||| || || | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832 | | || |||||| |||||||| ||||| || | || | ||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892 || ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 78951 ||||| |||||||| | | |||||||| ||| || || || || ||| || |||| | Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494 Query 78952 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCT 79008 || | ||||| || | || ||||| || | || || || | ||| || || Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434 Query 79009 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 79067 |||| ||| ||| | | || |||| | | | | | |||||||| | ||| | Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375 Query 79068 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATT 79127 ||| |||||||| ||| | | ||| || || || ||||||| | ||||||| Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315 Query 79128 ATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCT 79187 | || | |||||| | ||| || || |||||||| || || || || || ||||| Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255 Query 79188 AAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGG 79245 | ||| ||| | | || || | |||| ||||| ||||| | | | || Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197 Query 79246 ACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTT 79305 |||| ||||| || ||||| | | ||| | ||| ||||||| ||| | Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137 Query 79306 TCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATG 79365 |||| | ||||| || |||||||| | || ||||| || ||| ||| || Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATA 718077 Query 79366 GTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAA 79424 ||||| || || | | || | | |||| ||| | | ||||||||| | || Sbjct 718076 GTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAG-TCAAATGGAACTCTCAA 718018 Query 79425 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 79484 | || || || || || | ||||||||||| | | | || ||||| |||||| | || Sbjct 718017 CATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGTT 717958 Query 79485 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCT 79544 || || ||| | || ||| || || || | || |||| ||| | ||| | Sbjct 717957 GGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCTT 717898 Query 79545 GACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCA-AATCGTCCATCTATT---- 79599 | | || ||||| ||||| | || || | |||||| || | ||| || Sbjct 717897 GGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGTC 717838 Query 79600 ---ACAAACAT--------GTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646 | |||| | | | ||| || ||||| |||| ||||| || || || Sbjct 717837 TTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTTC 717778 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 || |||| | |||| | |||||| || | ||| | || ||||| || || Sbjct 717777 MTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCAA 717718 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 || | ||| || ||| |||||||| | |||||| |||| |||||| ||||||||||| Sbjct 717717 GTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAGT 717658 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTA 79826 |||| | || | ||||| || || | ||| | | | ||||| || | || | Sbjct 717657 TTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTCT--TTCTW 717600 Query 79827 TCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884 |||| ||| || ||||| ||| | |||||| || || || || |||| Sbjct 717599 CCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATCA 717540 Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944 || || ||| ||| |||| | | ||| | ||| || ||| |||| |||| Sbjct 717539 CTCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCTC 717480 Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004 ||||| || | ||| ||||||||||| ||| |||| ||||||| ||| || || Sbjct 717479 TTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCT 717420 Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064 || || |||||| | | || | ||| | | ||||| || ||||| ||||||||| Sbjct 717419 TTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAG 717360 Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124 || | ||| | | || |||| ||||| || || ||||| | ||||| |||||||| Sbjct 717359 TACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTG 717300 Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184 || | ||||| | ||| ||||| | ||||||||| ||||| ||||| || | || || Sbjct 717299 TTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAA 717240 Query 80185 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 80244 ||| ||| | || || || | ||| || || || || | || |||||| Sbjct 717239 GAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATT 717180 Query 80245 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCA-TGTTAAG 80303 || ||| || || || || ||||| || || ||| || || ||| || || Sbjct 717179 TGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACC 717120 Query 80304 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363 || ||||| |||||||| | | ||| || ||||| || || || ||||| || Sbjct 717119 AAG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGC 717061 Query 80364 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT-ATCCC 80422 ||| || || || ||| ||||| | ||||| || ||||| || || || | | Sbjct 717060 GTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTC 717001 Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 80482 | | ||||| || || || || | ||| | || ||| || ||||||||||||||||| Sbjct 717000 ACCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTAC 716942 Query 80483 TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 80542 || || ||||| | |||||| ||||||| || || |||||||| |||||||| | Sbjct 716941 CGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTGA 716882 Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-- 80600 |||||| ||| | || || | | | || | ||||||| ||| | || || Sbjct 716881 AGTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGACAGTTTCGT 716822 Query 80601 CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 80660 | || || ||||| || || || || ||| | ||||| |||||| | Sbjct 716821 AAACGTCAT--CAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGTTGTA 716764 Query 80661 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT--TGATACG 80718 ||| || || || |||| | ||| ||||||| |||| |||||| || || |||| | Sbjct 716763 TAAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGAT--G 716706 Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || |||||||| || | || || ||||| ||||| Sbjct 716705 GCAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671 >seq2 Length=1277918 Score = 201 bits (222), Expect = 2e-46 Identities = 578/884 (65%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||| || | ||||| || || || || || || | || ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| ||||| |||||||||||||| | || |||| | ||||| | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 |||||||| || || ||||| | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 |||||||| || || | ||| | |||| ||| || || || |||| || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 49908 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 ||| | | | | || | | | | | || || |||| |||||| || | Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGGCAA 605569 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || ||| | ||| |||||||| | || | |||||||| || || | || |||| Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | | || ||| || | ||| || || | |||||||| || || ||||||| || | Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCA-C 50142 | || || || || ||||| ||||| || || | |||| |||| || ||||| | Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATC 605749 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 | || ||||| |||||||| | || | ||| || |||||||||||||| || | Sbjct 605750 TGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 50262 | | ||||| ||| || || | || || || | ||| | || |||| || Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868 Query 50263 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 50322 || |||||||| || || || || || |||||||| | || || | ||| || || Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928 Query 50323 TCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 || | | | || |||| | || || || || || || || ||| ||| ||||| || Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988 Query 50383 GCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTATTCCAATCATTG 50439 ||||| || ||||| | ||||||| | | | || ||||| |||| Sbjct 605989 GCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATGT 606048 Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 50499 | ||| || || | ||| | |||||| ||||||| || || || || || | ||||| Sbjct 606049 AAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATAR 606108 Query 50500 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | ||| || ||| | | | ||||||||| | |||||||| Sbjct 606109 GCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268647367880