Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2 235 5e-57 >seq2 Length=1277918 Score = 235 bits (260), Expect = 5e-57 Identities = 578/870 (66%), Gaps = 15/870 (2%) Strand=Plus/Plus Query 13568 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13627 |||||| || ||||| || ||| ||||| |||||||||||||| || ||||| | Sbjct 605259 AATAACACCTGCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 605318 Query 13628 CAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAAC 13686 | ||||| |||||||| || ||||||||||| | |||| || | || || |||| Sbjct 605319 TAAGGATATGTTTTCCATGAAGTCAAATGGATTGGTA-ACATTGAAGATCTTTTCGCAAC 605377 Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746 | | | | || ||||||||||||| || |||| ||||| ||| || ||| || Sbjct 605378 CCAAGGCGACTAACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCAT 605437 Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806 ||||||| | | || ||||| || | || || ||||| || |||| Sbjct 605438 TCATACCCAACAAGGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAG 605497 Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13866 | ||| || || | || ||||| || || | | || | | || | || Sbjct 605498 CTTCTGAAATGATTCTYTCAACAATCT--TTGGATCTGGCTTGTTCTTCAAGTGRGAGAA 605555 Query 13867 TTA--AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13924 | |||| ||||| ||| || | || || ||||| | || | ||||| || || Sbjct 605556 CAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAA 605615 Query 13925 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGA 13984 || || || |||||||| ||| || || ||||| || || ||||||||||| ||||| Sbjct 605616 GGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGA 605675 Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044 ||||| | |||||||| ||||| || || | | || ||| ||||| || | || Sbjct 605676 GAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTT 605735 Query 14045 GTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAAT 14104 || |||||| | | |||||||| | |||| || || | || ||||| || Sbjct 605736 GTCTTGGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTAT 605795 Query 14105 AGCATTAAATAAATATTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAG 14162 ||||| ||||| |||| || || ||| || |||| |||||||| || | | |||| Sbjct 605796 GGCATTGAATAAGAATTCGTTTTCCTTAGKGTCCTTG--ATGTATGTGTCCAACAATAAG 605853 Query 14163 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCT 14222 || |||| ||||| ||||||||||| || || ||||| || || || | ||| Sbjct 605854 GAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCT 605913 Query 14223 TCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14281 || | ||| || || | || |||| |||| |||| || || || || |||||||| Sbjct 605914 TCTGGAATTTGRACYTCAGCAGAGAAAT-TTTCAACCAAGTTCTCRTTGACAATACCATC 605972 Query 14282 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGTTGAG 14338 | || ||||| || ||||| | | ||||||| | || | |||||| | Sbjct 605973 AGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCT 606032 Query 14339 TTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14398 || ||||| || ||||||||| || | ||| | ||| ||| ||||||| ||| ||| Sbjct 606033 GTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGC 606092 Query 14399 GACAGCTTTTTTATACATTACCCATATTTC 14428 | ||| | ||||| | |||| ||||| Sbjct 606093 TTCGGCTCTCTTATARGCTTCCCAAATTTC 606122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727898057800