Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2 257 2e-63 >seq2 Length=1277918 Score = 257 bits (284), Expect = 2e-63 Identities = 583/870 (67%), Gaps = 15/870 (2%) Strand=Plus/Plus Query 13356 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTC 13415 |||||| || ||||| || ||| ||||| |||||||| ||||| || ||||| | Sbjct 605259 AATAACACCTGCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 605318 Query 13416 CAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA-AACACTTTATCACAAC 13474 | ||||| |||||||| || || |||||||| || |||| || | || || |||| Sbjct 605319 TAAGGATATGTTTTCCATGAAGTCAAATGGATTGGTA-ACATTGAAGATCTTTTCGCAAC 605377 Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534 | | | | ||| ||||||||||||| || |||| ||||| ||| || ||| || Sbjct 605378 CCAAGGCGACTAACAATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCAT 605437 Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594 ||||||| | | || ||||| || | | || || ||||| || |||| Sbjct 605438 TCATACCCAACAAGGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCRATTTCAACAG 605497 Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13654 | || || || | | || ||| | || || | | || | | || | || Sbjct 605498 CTTCTGAAATGATTCTYTCAACAATCT--TTGGATCTGGCTTGTTCTTCAAGTGRGAGAA 605555 Query 13655 TTA--AACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13712 | |||| ||||| ||| || | || || ||||| | || | ||||| || || Sbjct 605556 CAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAA 605615 Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772 || || || |||||||| ||| || || ||||| || || ||||| ||||||||||| Sbjct 605616 GGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGA 605675 Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832 ||||| | |||||||| ||||| || || | |||| ||| ||||| || | || Sbjct 605676 GAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTT 605735 Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892 || | |||||| | | |||||||| | |||| || || | || ||||| || Sbjct 605736 GTCTTGGATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTAT 605795 Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAG 13950 ||||||||||| ||| || || ||| || |||| |||||||| || | | |||| Sbjct 605796 GGCATTGAATAAGAATTCGTTTTCCTTAGKGTCCTTG--ATGTATGTGTCCAACAATAAG 605853 Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010 || |||| ||||| |||||||| || || || ||||| || ||||| | ||| Sbjct 605854 GAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCT 605913 Query 14011 TCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATC 14069 |||| ||| || || | || |||| |||| ||||||| || || ||||||||||| Sbjct 605914 TCTGGAATTTGRACYTCAGCAGAGAAAT-TTTCAACCAAGTTCTCRTTGACAATACCATC 605972 Query 14070 ACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGTTGAG 14126 | || ||||| || ||||| | | ||||||| | || | |||||| | Sbjct 605973 AGAGGCAGCAAAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCT 606032 Query 14127 TTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14186 || ||||| || ||||||||| || | ||| | ||| ||| ||||||| ||| ||| Sbjct 606033 GTTGTTCCAGTCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGC 606092 Query 14187 GACAGCTTTTTTATACATTACCCATATTTC 14216 | ||| | ||||| | |||| ||||| Sbjct 606093 TTCGGCTCTCTTATARGCTTCCCAAATTTC 606122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588698299880