Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq16 89.7 4e-13
>seq16
Length=958289
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/222 (69%), Gaps = 10/222 (5%)
Strand=Plus/Minus
Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953
||| || || ||||||| || |||||||| | ||||| || || || || | |
Sbjct 204383 TCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 204324
Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013
||| |||||||| || || ||||| ||||||| |||||||| | || | |||||| ||
Sbjct 204323 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTT 204264
Query 43014 TTCGCTGATCAACTCTTTGACT---CTGC--CAACTGTGTCGCCAGCCTCGACGTCTACC 43068
|| ||| || |||| | || ||| | ||| | || || || ||||
Sbjct 204263 ATCTTGGATT-----TTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAG 204209
Query 43069 GTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| || || || ||||||| ||||| |||||||||||||||
Sbjct 204208 GTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATT 204167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369520984986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |