Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq11 307 1e-78 seq2 210 3e-49 >seq11 Length=1501259 Score = 307 bits (340), Expect = 1e-78 Identities = 899/1374 (65%), Gaps = 32/1374 (2%) Strand=Plus/Minus Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAAT 71753 |||||||||||| |||| ||||| || || || || |||| | |||| | ||| Sbjct 717813 CAAGGCAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCAGAGTATTCAACAAT 717754 Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813 |||| || | || | |||||||| || || || | ||| || ||| ||||| Sbjct 717753 TTCACAACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGGTTGGACTTCTTGTT 717694 Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873 ||| | |||||| |||| ||| || ||||||||||||||| | || | ||||| || || Sbjct 717693 ACAGGAATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGC 717634 Query 71874 TTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGT 71931 | ||| | | | ||||| || | || | | |||| ||| || ||||| Sbjct 717633 GTACCACAACTTTTGGGCCTTGATGGTCTT--TCTWCCTCTWCCTTCCAACTCATATTGA 717576 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGA 71991 ||| | |||||| || || || |||||| || || ||| |||| | ||| Sbjct 717575 TCATAAAGCTTTTCGAATTCATCACCATAAGCATCACTCAAACCTGGAGCTTCACTAGGA 717516 Query 71992 CACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAA 72051 | | ||| | ||| || ||| | || |||| ||||| || | ||| ||||||||| Sbjct 717515 GAGAACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAA 717456 Query 72052 AGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCG 72111 || ||| |||| ||||||| ||| || || || || |||||| | | || Sbjct 717455 AGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCTTTACCGTGGTTCTTTCTGATGTCA 717396 Query 72112 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGT 72171 | ||| | | ||||| || ||||| ||||||||||| | ||| | | || || | Sbjct 717395 ATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGTCTC 717336 Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231 ||||| || || ||||| | ||||| |||||||| || | ||||| | ||| ||||| Sbjct 717335 TTGTTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATC 717276 Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTA 72291 | ||||||||| | ||| ||||| || | || || ||| ||| | || ||| Sbjct 717275 AAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGG 717216 Query 72292 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 72351 || | ||| || || || || | || |||||| || ||| || || || || Sbjct 717215 ATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCG 717156 Query 72352 TAGATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTG 72410 ||||| || || || || ||| ||| || || || ||||| |||||||| | Sbjct 717155 TAGATACCGTCAATGGAGTCGTCCTTCATTGATACCAAG-AAACAAGAGGACATTTGAGG 717097 Query 72411 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 72470 | ||| || ||||| || || || ||||| ||||| || || || ||| ||||| Sbjct 717096 TCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACAT 717037 Query 72471 TAGATTGTACGTCTCAATAGCTGATTCTAT-ATCCCATTGATGTATTCCTACCGCGACAC 72529 | ||||| || ||||| || || || | || | || || || || || || | Sbjct 717036 CAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTCACCG-TGAATACCAACAGCAACTC 716978 Query 72530 GCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATT 72589 ||| | || || || ||||||||||||||||| || || ||||| | || ||| Sbjct 716977 TCATGATCAAGTGTTGCGGTCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATC 716918 Query 72590 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 72649 ||||||| || || |||||||| |||||||| ||||||| ||| | || || | | Sbjct 716917 TTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTATCGAAGATGATGGCAG 716858 Query 72650 AATTGAGTTTATCCTTATATTTGTTAACTATATC--CATGGTGATACTTGAAATAATCGG 72707 || || | ||||||| ||| | || | || | || || ||||| || || Sbjct 716857 CATCAAGAGTGTCCTTATGTTTCATGACAGTTTCGTAAACGTCAT--CAGAAATCATTGG 716800 Query 72708 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 72767 || || ||| | ||||| |||||| |||| || || || |||| | || Sbjct 716799 GGACAAAACACCGTTTCTCTCGTTAACGTAGTTGTATAAGTCTTCGATGACTTGAGAGAA 716740 Query 72768 TAGtttttttGTTTCCTTGTGTAGATT--TGATACGGCTATTCTGGCGGCTAGAATGGCA 72825 | ||||||| |||| |||||| || || |||| ||| |||||||| || |||| || Sbjct 716739 TTGTTTTTTGGTTTGCTTGTGAAGGTTACTGAT--GGCAATTCTGGCAGCAAGAACAGCG 716682 Query 72826 TAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTC 72884 ||||| ||||| || || || || ||| | || || || | |||| ||||| Sbjct 716681 TAATCAGGATGGACAGTGGT-CATGTAGGCACAAGTCTCAGCAGCTAAGTTGTCTAATTC 716623 Query 72885 TACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT--AGCTATTTTAATAGGA 72942 | || | || || | || | || || | ||| | | || || | ||| Sbjct 716622 GATGGTAGAAACACCTTCGTAGACACC--GGTAATGATTCTTTGGGTGATCTTGACAGGG 716565 Query 72943 TCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCA 73002 || ||||| | || || ||| || ||||||| | | ||| | || |||||||||||| Sbjct 716564 TCGATATGCTTAGAGTCTAAACCGTAACATAGTCTGGCAATTCTGGAAGTGATTTTATCA 716505 Query 73003 AACATAACA-----TTTTCCCGGCATCCATTTCGTTTAACGACAAACATTTTTG 73051 || |||| ||||| | || | || |||||| |||||||||| || Sbjct 716504 AATTGAACAGGGACTTTTCTC-----CCGTCTCTTTTAACAACAAACATTTGTG 716456 >seq2 Length=1277918 Score = 210 bits (232), Expect = 3e-49 Identities = 584/888 (66%), Gaps = 20/888 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||| || | ||||| || || || ||||| || | || ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| ||||| |||||||||||||| | || |||| | ||||| | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | |||||| | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 |||||||| || || | ||| | |||| ||| || || || |||| || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068 ||| || | | | | || | | | | | || || |||| |||||| | Sbjct 605511 ---TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGG 605566 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | || || ||| | ||| || ||||| | || || |||||||| || || | || | Sbjct 605567 CAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAG 605626 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 |||| | || ||| || | ||| || |||| ||||||||||| || ||||||| | Sbjct 605627 GCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACAC 605686 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG----CACTGTCATGTATC 42244 | || || || || || |||| ||||| || || ||| || | |||| || ||| Sbjct 605687 CCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCA-AACAGGGCGTCCTTGTCTTGGATC 605745 Query 42245 CA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 42303 || || || ||||| |||||||| | || | ||| || |||||||||||||| || Sbjct 605746 CATCTGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAA 605804 Query 42304 GAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTC 42363 | | | ||||| ||| || || | ||||| || | ||| | || |||| Sbjct 605805 TAAGAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTC 605864 Query 42364 TGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTG 42423 ||| || |||||||| || || || || || |||||||| |||| || | || || Sbjct 605865 TGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTG 605924 Query 42424 TACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAA 42483 || || | | | || |||| | || || || || || || || ||| ||| ||||| Sbjct 605925 RACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAA 605984 Query 42484 AAACGCCAATACATGTTTTATAAAATATTTTTCG---TCCGGTGTTAATTTATTCCAATC 42540 || ||||| || ||||| || ||||| || || || ||||| || Sbjct 605985 GAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTC 606044 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 || | ||| || || | ||| | |||||| | ||||| || || ||||| || | || Sbjct 606045 ATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTT 606104 Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 ||| | ||| || ||| | | | |||||||| | |||||||| Sbjct 606105 ATARGCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139057382920