Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 154 2e-32 seq17 120 5e-22 >seq2 Length=1277918 Score = 154 bits (170), Expect = 2e-32 Identities = 393/594 (66%), Gaps = 6/594 (1%) Strand=Plus/Minus Query 124983 AGTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCT 125042 || |||||| | |||| || |||| || | ||| ||||||||| || || | || Sbjct 606155 AGAAGATTTGTCTTGTTCCCAATCAAGTTCCCTGAAATTTGGGAAGCYTATAAGAGAGCC 606096 Query 125043 CAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG 125102 | || || || ||||| | ||||| | ||| |||||||||| | | || ||| | Sbjct 606095 GAAGCTTCTTTCTGGACAGCTGAAGAAATTGATTTGTCCAAGGATTTACATGACTGGAAC 606036 Query 125103 ACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGG 125161 | | ||| ||||| || || ||||| || | | | |||||||||||||| | Sbjct 606035 AACAGAATGAATGAAAACGAAAGATTCTTTATTTC-YAGAGTKTTGGCCTTCTTTGCTGC 605977 Query 125162 CTCCGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTC 125220 ||| ||||| || ||||| || || || |||| | |||||| || | |||| Sbjct 605976 CTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAAT-TTCTCTGCTGARGTYCAAATTC 605918 Query 125221 CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGT 125280 |||| | ||| || || || |||||||||||||| || ||| | ||||| |||| | Sbjct 605917 CAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACATCCACTCAGAAACCT 605858 Query 125281 ACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAAC 125339 |||| | || | |||| |||| || | | || | |||| || | | || || Sbjct 605857 ACTCCTTATTGTTGGACACATACA-TCAAGGACMCTAAGGAAAACGAATTCTTATTCAAT 605799 Query 125340 GCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGAT 125399 || || || || | || || ||||||| |||||| || | |||||| | Sbjct 605798 GCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCCAA 605739 Query 125400 GACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTC 125459 ||| | | | || || || |||||||| || ||||| || || ||||| ||||| Sbjct 605738 GACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTC 605679 Query 125460 TTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519 || || || ||||| || ||||| ||| | |||||| || | ||||| || || Sbjct 605678 TTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTTTG 605619 Query 125520 ACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 || | |||||||| || | ||||||| || ||||| |||||||||| Sbjct 605618 ACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCC 605565 >seq17 Length=1055512 Score = 120 bits (132), Expect = 5e-22 Identities = 182/254 (72%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 70037 GATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAG 70096 ||||| || || || ||||| ||| | || ||||||||||| ||||| ||||| ||||| Sbjct 816644 GATTCTCTTGGATTGACCGATAGAGAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAA 816703 Query 70097 TGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTT 70156 ||||| |||| || | ||||||| |||||| | |||||||| | || |||| Sbjct 816704 TGGAGACACTTTGGTGCTGAGTATGTGGACTGCCACACAGACTACACCGGCAAGGGATAC 816763 Query 70157 GATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGT 70215 || ||| || || | ||||| ||| || |||||||| ||| || || || ||| | Sbjct 816764 GACCAACTG-AGTGAGATCATCCACAAGCTAAAGACCAACCCATACGACAGAAGAATCAT 816822 Query 70216 AATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCAC-TGTT 70274 |||| | ||||| ||| |||| || | ||||||| || || || || ||| | || Sbjct 816823 CATGTCTGCGTGGAACCCTCCAGACTTCAAGAAAATGGCCCTTCCCCCATGCCACGTCTT 816882 Query 70275 TGGCTCAGTTTTAC 70288 | || ||||| ||| Sbjct 816883 TTGC-CAGTTCTAC 816895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059042524920