Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq14 176 3e-39 seq16 149 5e-31 seq1 122 6e-23 >seq14 Length=450723 Score = 176 bits (194), Expect = 3e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| || |||||||| |||||||| || ||||| |||||||| || | Sbjct 422090 CCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 422149 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| ||||||||||||| || |||||| | || || | |||||| || ||| Sbjct 422150 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 422209 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||| ||| ||||| || |||| ||| | ||| || Sbjct 422210 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACC 422269 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || |||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 422270 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319 >seq16 Length=958289 Score = 149 bits (164), Expect = 5e-31 Identities = 175/236 (74%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||||||||| || || || || ||||| |||||||| || | Sbjct 204394 CCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGAT 204335 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| ||||| || ||||| | ||||| | |||||| || |||| Sbjct 204334 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 204275 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || ||||| ||| ||| || |||| || ||| ||| || Sbjct 204274 ATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACT 204215 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGC---ATATTTGA 15369 |||||||| ||||| ||||| || | ||||| |||||||||||| |||||||| Sbjct 204214 TCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATATTTGA 204159 >seq1 Length=232064 Score = 122 bits (134), Expect = 6e-23 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||||| |||||||| | || || || ||||| |||||||| || Sbjct 90784 CCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGAC 90725 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||||||||| || |||| | | || || | |||||| || |||| Sbjct 90724 AAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGA 90665 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || ||| ||| ||| || ||||| ||| || ||| || Sbjct 90664 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACT 90605 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || |||||||| ||||| || | || || |||||| Sbjct 90604 TCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAAA 90566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179124960997