Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq14 170 4e-37
seq2 159 8e-34
seq16 150 4e-31
seq1 138 3e-27
>seq14
Length=450723
Score = 170 bits (188), Expect = 4e-37
Identities = 177/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| ||| | || ||||| || || || || |||||||||
Sbjct 422090 CCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 422149
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||||||||||| ||| || ||||| || |||| || ||||| ||||| ||
Sbjct 422150 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 422209
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| |||||||| || || || || || || ||| | || | || ||| || ||| |||
Sbjct 422210 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACC 422269
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564
|| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct 422270 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTGT 422321
>seq2
Length=1277918
Score = 159 bits (176), Expect = 8e-34
Identities = 367/547 (67%), Gaps = 10/547 (2%)
Strand=Plus/Minus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGG 268813
|||| |||||||| ||||| | |||||| | ||| |||| | || ||| || |||
Sbjct 606098 GCCGAAGCTTCTTTCTGGACAGCTGAAGAAATTGATTTGTCCAAGGATTTACATGACTGG 606039
Query 268814 AAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTG-CGTTTTTTGC 268869
|| || || || | || |||||| ||||| || | | | ||| | || |||||
Sbjct 606038 AACAACAGAATGAATGAAAACGAAAGATTCTTTATTTCY-AGAGTKTTGGCCTTCTTTGC 605980
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| ||||||||| || || || || | || || || |||| | || || || ||
Sbjct 605979 TGCCTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTCTCTGCTGARGTYCAAAT 605920
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| ||||||| ||||| || || ||||| || || ||||| || || ||||| |
Sbjct 605919 TCCAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAAAACATCCACTCAGAAAC 605860
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
||| |||| | || || || || | || || ||||| || ||||
Sbjct 605859 CTACTCCTTATTGTTGGACACATACATCAAGGACMCTAAGGAAAACGAATTCTTATTCAA 605800
Query 269050 TTCTATGAGAACTATGGACTGTG-TGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAA 269108
| | || ||| || ||| | | |||| | |||||||| | | ||||||
Sbjct 605799 TGCCATAGAAACCATTC-CTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGGATCC 605741
Query 269109 ACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATAT 269165
| || | | |||| | | ||||| | |||||||| || ||||| || ||| | |
Sbjct 605740 AAGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCT 605681
Query 269166 TCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGAT 269225
|||| || || || ||||| |||||||| ||||| ||||| | ||| | ||||| || |
Sbjct 605680 TCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCCTGGTT 605621
Query 269226 TAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTT 269285
| || ||||| ||||| ||||| |||| ||||||||||||||| ||||| || ||||
Sbjct 605620 TGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGCCTGTT 605561
Query 269286 TATTATT 269292
| || ||
Sbjct 605560 TGTTGTT 605554
>seq16
Length=958289
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| ||| | ||| ||||| || || || || |||||||||
Sbjct 204394 CCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGAT 204335
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||||||||| | ||| || |||||||| || | || ||||||||||| ||
Sbjct 204334 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 204275
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| ||||| || || || | || ||| || | || || |||| ||| ||
Sbjct 204274 ATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACT 204215
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|||| || || |||||||| || | |||||| ||||| || ||||||
Sbjct 204214 TCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATT 204167
>seq1
Length=232064
Score = 138 bits (152), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || || |||| ||| ||||| ||||| || || || || || |||||
Sbjct 90784 CCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGAC 90725
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||| || ||||||| ||| || |||| || |||| || ||||||||||| ||
Sbjct 90724 AAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGA 90665
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || ||||| || || ||| || | ||| ||| ||| ||| ||
Sbjct 90664 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACT 90605
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| | ||||| |||||||| || | || || |||||
Sbjct 90604 TCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 90567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398149211036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |