Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq14 104 2e-17
seq1 104 2e-17
seq16 87.8 2e-12
>seq14
Length=450723
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| || || |||| || ||||||||||| | ||| || ||
Sbjct 422090 CCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 422149
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || || | || || || | |||||||||||||| || || || ||
Sbjct 422150 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 422209
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | ||||| ||||| || | ||| | |||| |||||
Sbjct 422210 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACC 422269
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||||| || ||||| |||||||| || || || |||||
Sbjct 422270 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 422316
>seq1
Length=232064
Score = 104 bits (114), Expect = 2e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 94778 ACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCG 94837
|| || ||||| |||| | || || ||||| || ||||||||||| | ||| || ||
Sbjct 90787 ACACCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCA 90728
Query 94838 CTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
|| ||| || ||| || | || || || |||||||||||||| ||||| ||
Sbjct 90727 GACAAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGT 90668
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
||||||||||| ||||| | || || |||||||| ||| ||| || || | |||
Sbjct 90667 GGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCG 90608
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| || | || ||||| || || || | || || |||||
Sbjct 90607 ACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 90567
>seq16
Length=958289
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| || || || | || ||||||||||| | ||| || ||
Sbjct 204394 CCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAG-- 204337
Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | || |||| || || || ||||||| |||||||| ||||| || |
Sbjct 204336 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTG 204277
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||| || || | ||||| | ||| || || | | | |||| || |
Sbjct 204276 GAATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAA 204217
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | |||||||| || || || | ||||| ||||| || |||||
Sbjct 204216 CTTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCAT 204168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291104738120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |