Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2 159 4e-34
>seq2
Length=1277918
Score = 159 bits (176), Expect = 4e-34
Identities = 529/824 (64%), Gaps = 21/824 (3%)
Strand=Plus/Plus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||| ||||| ||||| || || || ||||| || | || ||||| |
Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331
Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
||||| || ||||||||||| | || || || || | ||||||| | |||
Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391
Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364
|||||||| || || ||||| | ||||| ||| || ||| ||||||||| | |||
Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451
Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAG-AT---TTTTCTATAGAGACGGCTTC---AAC 21417
|| |||| || |||| ||| || ||||| || || ||||| ||
Sbjct 605452 GCAACTGGAATGGC----ATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAAAT 605507
Query 21418 AATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACA 21477
||| | | | ||| | || | || | | || || |||| ||||||
Sbjct 605508 GATTCTYTCAACAATCTT---TGGATCTGGCTTGTTCTTCAAGTGRGAGAACAACAAACA 605564
Query 21478 TGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACC 21537
||||| ||| || |||||||| || || | || || || || || || || |||||
Sbjct 605565 GGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACC 605624
Query 21538 GGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAAT 21597
||||| || ||| |||| || ||||| || || | ||||||| ||| || ||||| |
Sbjct 605625 AGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGAC 605684
Query 21598 GCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATAT 21657
|||||||| ||||| || ||||| | || |||| | | | || || || ||
Sbjct 605685 ACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGAT 605744
Query 21658 CCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717
|||| | ||||||| |||||||| || || | ||| || || || || || ||
Sbjct 605745 CCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAA 605804
Query 21718 -AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATT 21775
|||| ||| ||||| | || | ||| || ||
Sbjct 605805 TAAGA--ATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTT 605862
Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835
|| || || || ||||| ||| || || || || || ||||| | || |||| | |
Sbjct 605863 TCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATT 605922
Query 21836 TGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
|| || || | | | || || | ||||||| || || || || |||||| ||| |||
Sbjct 605923 TGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCA 605982
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAA 21952
|| || ||||| | | ||||| ||| |||||| || | | | || |||||
Sbjct 605983 AAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAG 606042
Query 21953 TCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
|| |||||| || || ||||| | |||||||| |||||| ||
Sbjct 606043 TCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAA 606086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900686971080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |