Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2 159 4e-34 >seq2 Length=1277918 Score = 159 bits (176), Expect = 4e-34 Identities = 529/824 (64%), Gaps = 21/824 (3%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| |||||| ||||| ||||| || || || ||||| || | || ||||| | Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 ||||| || ||||||||||| | || || || || | ||||||| | ||| Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 |||||||| || || ||||| | ||||| ||| || ||| ||||||||| | ||| Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAG-AT---TTTTCTATAGAGACGGCTTC---AAC 21417 || |||| || |||| ||| || ||||| || || ||||| || Sbjct 605452 GCAACTGGAATGGC----ATCAATGAAGTATCTCTTTTCRATTTCAACAGCTTCTGAAAT 605507 Query 21418 AATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACA 21477 ||| | | | ||| | || | || | | || || |||| |||||| Sbjct 605508 GATTCTYTCAACAATCTT---TGGATCTGGCTTGTTCTTCAAGTGRGAGAACAACAAACA 605564 Query 21478 TGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACC 21537 ||||| ||| || |||||||| || || | || || || || || || || ||||| Sbjct 605565 GGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACC 605624 Query 21538 GGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAAT 21597 ||||| || ||| |||| || ||||| || || | ||||||| ||| || ||||| | Sbjct 605625 AGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGAC 605684 Query 21598 GCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATAT 21657 |||||||| ||||| || ||||| | || |||| | | | || || || || Sbjct 605685 ACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGAT 605744 Query 21658 CCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 |||| | ||||||| |||||||| || || | ||| || || || || || || Sbjct 605745 CCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAA 605804 Query 21718 -AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATT 21775 |||| ||| ||||| | || | ||| || || Sbjct 605805 TAAGA--ATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTT 605862 Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835 || || || || ||||| ||| || || || || || ||||| | || |||| | | Sbjct 605863 TCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATT 605922 Query 21836 TGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895 || || || | | | || || | ||||||| || || || || |||||| ||| ||| Sbjct 605923 TGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCA 605982 Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAA 21952 || || ||||| | | ||||| ||| |||||| || | | | || ||||| Sbjct 605983 AAGAAGGCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAG 606042 Query 21953 TCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 || |||||| || || ||||| | |||||||| |||||| || Sbjct 606043 TCATGTAAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAA 606086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900686971080