Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq11 318 7e-82
seq2 210 3e-49
>seq11
Length=1501259
Score = 318 bits (352), Expect = 7e-82
Identities = 1324/2074 (64%), Gaps = 46/2074 (2%)
Strand=Plus/Minus
Query 61991 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049
||||| |||||||||||| ||| || || | || || | | ||| ||||| || || |
Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673
Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109
| | || |||||| ||||| || ||||| || | || | ||| |
Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613
Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169
|| ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| |
Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553
Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62228
||||| |||||||| | | |||||||| ||| || || || || ||| || |||| |
Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494
Query 62229 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62285
|| | ||||| || | || ||||| || | || || || | ||| || |
Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434
Query 62286 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62344
|||| ||| ||| | | || |||| | | | | | |||||||| | ||| |
Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375
Query 62345 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATT 62404
||| |||||||| ||| | | ||| || || || | ||||| | | |||||
Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315
Query 62405 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62464
| || | |||||| | ||| || ||||| ||||| || || || || || |||||
Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255
Query 62465 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 62522
| ||| ||| | | || || | |||| ||||| | ||| | | | ||
Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197
Query 62523 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62582
|||| ||| | | ||| | || |||||| | || |
Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137
Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642
| || | ||||| |||||||| ||| | || ||||| ||| ||| ||| ||
Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATA 718077
Query 62643 GTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTC-CAGGCTATCAAATGGATAATTTA 62700
||||| ||||| | | || | | |||| ||| ||| | |||||||| | |
Sbjct 718076 GTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGT--CAAATGGAACTCTCA 718019
Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760
| | || || || || || | ||||||||||| | | | || ||||| |||||| | |
Sbjct 718018 ACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGT 717959
Query 62761 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62820
| || || ||| | || ||| || || || | || |||| ||| | ||
Sbjct 717958 TGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCT 717899
Query 62821 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCATCTATT--- 62876
|| |||| ||||| ||||| | || || | |||||| || ||| ||
Sbjct 717898 TGGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGT 717839
Query 62877 ----ACAAACAT--------GTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCT 62922
| |||| | | | |||||||||||| |||| ||||| || || |
Sbjct 717838 CTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTT 717779
Query 62923 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTA 62982
| || |||| | |||| | || ||| || | || | ||||| || || |
Sbjct 717778 CMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCA 717719
Query 62983 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 63042
| || | ||| || ||| |||||||| | |||||| |||| |||||||||||||||||
Sbjct 717718 AGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAG 717659
Query 63043 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 63102
||||| | || | ||||| || || | ||| | | | ||||| || | | |
Sbjct 717658 TTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTCTTTCTWC 717599
Query 63103 ATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63162
||| | ||| || ||| | ||| | |||||| || || || || |||
Sbjct 717598 CTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATCAC 717539
Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222
||| || ||| |||| ||| | | ||| | ||| || | | |||| |||| |
Sbjct 717538 TCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCTCT 717479
Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63282
|||| || | ||| ||||||||||| ||| |||| ||||||| ||| ||| || |
Sbjct 717478 TCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCTT 717419
Query 63283 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63342
| || |||||| | | || | ||| | | ||||| || ||||| ||||||||||
Sbjct 717418 TACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGT 717359
Query 63343 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63402
| | ||| | | || || | ||||| || || ||||| | ||||| |||||||| |
Sbjct 717358 ACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGT 717299
Query 63403 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63462
| | ||||| | ||| ||||| | ||| || || |||| |||||||| | || ||
Sbjct 717298 TGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAG 717239
Query 63463 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63522
||| ||| | || || || | ||| || || || || | || ||||||
Sbjct 717238 AACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTT 717179
Query 63523 ATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAGT 63581
|| ||| || || ||||| |||||||| || ||| || || ||| || ||
Sbjct 717178 GAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACCA 717119
Query 63582 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63641
|| ||||| |||||||| | | ||| || ||||| || || || ||||| |||
Sbjct 717118 AG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCG 717060
Query 63642 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCA 63700
|| || || || ||| ||| | | ||||| || ||||| || ||| || | ||
Sbjct 717059 TGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTCA 717000
Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760
| ||||| || || || || | ||| | || ||| || |||||||||||||||||
Sbjct 716999 CCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTACC 716941
Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63820
||| || ||||| | || ||| ||||||| || || |||||||| |||||||| ||
Sbjct 716940 GTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTGAA 716881
Query 63821 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC--C 63878
||||| ||| | || || | | | || | ||||||| ||| | || | ||
Sbjct 716880 GTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGACAGTTTCGTA 716821
Query 63879 ATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 63938
| || || ||||| || || || || ||| | ||||| |||||| ||
Sbjct 716820 AACGTCAT--CAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGTTGTAT 716763
Query 63939 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT--TGATACGG 63996
|| || || || |||| | ||| ||||||| |||| |||||| || || |||| ||
Sbjct 716762 AAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGAT--GG 716705
Query 63997 CTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
| |||||||| || |||| || ||||| |||||
Sbjct 716704 CAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671
>seq2
Length=1277918
Score = 210 bits (232), Expect = 3e-49
Identities = 580/884 (66%), Gaps = 12/884 (1%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| ||| || | ||||| || || || || || || | || ||||| |||
Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
|||||||| ||||| |||||||||||||| | || |||| | ||||| | | |
Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
|||||||| || |||||||| | ||| ||||||| ||| |||||| || | |
Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451
Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
|||||||| || || | ||| | |||| ||| || || || |||| || ||
Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510
Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
||| | | | | || | | | | | || || |||| |||||| || |
Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGGCAA 605569
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| || ||| | ||| |||||||| | || | |||||||| || || | || ||||
Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| | || ||| || | ||| || || | ||| |||||||| || ||||||| || |
Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCA-C 33486
| || ||||| || |||| ||||| || || | |||| |||| || ||||| |
Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATC 605749
Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546
| || ||||| |||||||| | || | ||| || |||||||||||||| || |
Sbjct 605750 TGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808
Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606
| | ||||| ||| || || | || || || | ||| | || |||| ||
Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868
Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666
|| |||||||| || || || || || |||||||| | || || | ||| || ||
Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928
Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726
|| | | | || ||| |||| || || || || || || ||| ||| ||||| ||
Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988
Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 33783
||||| || ||||| || |||||| | | | | || ||||| ||||
Sbjct 605989 GCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATGT 606048
Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843
| ||| || || | ||| | |||||| ||||||| || || || || || | |||||
Sbjct 606049 AAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATAR 606108
Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
| ||| || ||| | | ||||||||| | ||||||||
Sbjct 606109 GCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947067623720
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