Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq11 318 7e-82 seq2 210 3e-49 >seq11 Length=1501259 Score = 318 bits (352), Expect = 7e-82 Identities = 1324/2074 (64%), Gaps = 46/2074 (2%) Strand=Plus/Minus Query 61991 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 ||||| |||||||||||| ||| || || | || || | | ||| ||||| || || | Sbjct 718732 CAATGGTGAATTGAATGGCAGCAGAGGCAGCTTGTGTTCTCAAATAATACATACCAGTCT 718673 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109 | | || |||||| ||||| || ||||| || | || | ||| | Sbjct 718672 TCAATCCCTTACTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATGGTTGGAGCCA 718613 Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169 || ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| | Sbjct 718612 TGATGTGGATGTTCATGGAGTGAGATTGATCAATGAATGCTTGTCTATCAGCAGCCATGT 718553 Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62228 ||||| |||||||| | | |||||||| ||| || || || || ||| || |||| | Sbjct 718552 CAATGATGGTCTTTTGAGATAATTCCCAAACAGTCTTGTACAAGTC-CTTCATTTCTTGT 718494 Query 62229 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62285 || | ||||| || | || ||||| || | || || || | ||| || | Sbjct 718493 GGGATGTTTGGTAACTGTTGGATGGAACCGTTGTTGGCAATGATGTTGGACTTCATGGCT 718434 Query 62286 TCATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62344 |||| ||| ||| | | || |||| | | | | | |||||||| | ||| | Sbjct 718433 TCATCCCA-AATACCCATATCAACTAAATCCTTCAACAAGTATGGATTAACAATTTGGTA 718375 Query 62345 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATT 62404 ||| |||||||| ||| | | ||| || || || | ||||| | | ||||| Sbjct 718374 TTCACCAGACAAGGTTCTTCTGGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATT 718315 Query 62405 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62464 | || | |||||| | ||| || ||||| ||||| || || || || || ||||| Sbjct 718314 GTAACCTAGAATTTGGGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCT 718255 Query 62465 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 62522 | ||| ||| | | || || | |||| ||||| | ||| | | | || Sbjct 718254 TAAACC--ATGCTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATARGTTTGTTGGA 718197 Query 62523 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62582 |||| ||| | | ||| | || |||||| | || | Sbjct 718196 GCAACRTTCCAGTAGTCGTATTGCAAGACACCTTGGGAAGCTGGTGATCCTTCGTAAGAG 718137 Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642 | || | ||||| |||||||| ||| | || ||||| ||| ||| ||| || Sbjct 718136 GCATAGGTACCTTCAACCTCAGCTAATTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATA 718077 Query 62643 GTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTC-CAGGCTATCAAATGGATAATTTA 62700 ||||| ||||| | | || | | |||| ||| ||| | |||||||| | | Sbjct 718076 GTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAGT--CAAATGGAACTCTCA 718019 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | | || || || || || | ||||||||||| | | | || ||||| |||||| | | Sbjct 718018 ACATCATGAARGCATCAGCAAGACCTTGAACACCTAAAGCAATTGGTCTGTGTCTCATGT 717959 Query 62761 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62820 | || || ||| | || ||| || || || | || |||| ||| | || Sbjct 717958 TGGATCTTCTAGCAGTTTCAACAGGGTAGTAGTTTCTGTCAATAACAGCATTCAAGTTCT 717899 Query 62821 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCATCTATT--- 62876 || |||| ||||| ||||| | || || | |||||| || ||| || Sbjct 717898 TGGCAATGACTTTACAGACATCATGAAGCTTTTGGAAATCATAAGTTTGWGTCTTTTGGT 717839 Query 62877 ----ACAAACAT--------GTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCT 62922 | |||| | | | |||||||||||| |||| ||||| || || | Sbjct 717838 CTTCAGAAACCTTGACAAAGGCTGGCAAGGCAACAGARGCCAAGTTACARACAGCAGTTT 717779 Query 62923 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTA 62982 | || |||| | |||| | || ||| || | || | ||||| || || | Sbjct 717778 CMTTKTCATCAGAGTATTCAACAATTTCACAACACAAGTTGGAGGAYTTGATGGTACCCA 717719 Query 62983 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 63042 | || | ||| || ||| |||||||| | |||||| |||| ||||||||||||||||| Sbjct 717718 AGTTCTTTTGGTTGGACTTCTTGTTACAGGAATCCTTGTAAACAATGAATGGAGTACCAG 717659 Query 63043 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 63102 ||||| | || | ||||| || || | ||| | | | ||||| || | | | Sbjct 717658 TTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTGATGGTCTTTCTWC 717599 Query 63103 ATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63162 ||| | ||| || ||| | ||| | |||||| || || || || ||| Sbjct 717598 CTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAATTCATCACCATAAGCATCAC 717539 Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222 ||| || ||| |||| ||| | | ||| | ||| || | | |||| |||| | Sbjct 717538 TCAAACCTGGAGCTTCACTAGGAGAGAACAAGGTCCAATCAGCATTGGCCTTGACTCTCT 717479 Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63282 |||| || | ||| ||||||||||| ||| |||| ||||||| ||| ||| || | Sbjct 717478 TCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTCTCTGGCTCTGATTTCTTCTT 717419 Query 63283 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63342 | || |||||| | | || | ||| | | ||||| || ||||| |||||||||| Sbjct 717418 TACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAGT 717359 Query 63343 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63402 | | ||| | | || || | ||||| || || ||||| | ||||| |||||||| | Sbjct 717358 ACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGT 717299 Query 63403 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63462 | | ||||| | ||| ||||| | ||| || || |||| |||||||| | || || Sbjct 717298 TGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACCGTTGGTACCTGCAATGTAAG 717239 Query 63463 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63522 ||| ||| | || || || | ||| || || || || | || |||||| Sbjct 717238 AACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACCACCAGCAGTCTTGGAGATTT 717179 Query 63523 ATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAGT 63581 || ||| || || ||||| |||||||| || ||| || || ||| || || Sbjct 717178 GAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGAGTCGTCCTTCATTGATACCA 717119 Query 63582 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63641 || ||||| |||||||| | | ||| || ||||| || || || ||||| ||| Sbjct 717118 AG-AAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATTGAACAAAGTTGGAGAGGCG 717060 Query 63642 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCA 63700 || || || || ||| ||| | | ||||| || ||||| || ||| || | || Sbjct 717059 TGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATGACTTTGTCGATGTTTTCA 717000 Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760 | ||||| || || || || | ||| | || ||| || ||||||||||||||||| Sbjct 716999 CCG-TGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGGTCTTTCAACGATCTTACC 716941 Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63820 ||| || ||||| | || ||| ||||||| || || |||||||| |||||||| || Sbjct 716940 GTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACCAAAGTAGTTGTAGTTGAA 716881 Query 63821 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC--C 63878 ||||| ||| | || || | | | || | ||||||| ||| | || | || Sbjct 716880 GTCTCTATCGAAGATGATGGCAGCATCAAGAGTGTCCTTATGTTTCATGACAGTTTCGTA 716821 Query 63879 ATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 63938 | || || ||||| || || || || ||| | ||||| |||||| || Sbjct 716820 AACGTCAT--CAGAAATCATTGGGGACAAAACACCGTTTCTCTCGTTAACGTAGTTGTAT 716763 Query 63939 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT--TGATACGG 63996 || || || || |||| | ||| ||||||| |||| |||||| || || |||| || Sbjct 716762 AAGTCTTCGATGACTTGAGAGAATTGTTTTTTGGTTTGCTTGTGAAGGTTACTGAT--GG 716705 Query 63997 CTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 | |||||||| || |||| || ||||| ||||| Sbjct 716704 CAATTCTGGCAGCAAGAACAGCGTAATCAGGATG 716671 >seq2 Length=1277918 Score = 210 bits (232), Expect = 3e-49 Identities = 580/884 (66%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||| || | ||||| || || || || || || | || ||||| ||| Sbjct 605272 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAGGATATGTTT 605331 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| ||||| |||||||||||||| | || |||| | ||||| | | | Sbjct 605332 TCCATGAAGTCAAATGGATTGGTAACATTGAAGATCTTTTCGCAACCCAAGGCGACTAAC 605391 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 |||||||| || |||||||| | ||| ||||||| ||| |||||| || | | Sbjct 605392 AATCTATCAGCAACGAATTCAACGTATTGGTTCATCAAGTCAGCATTCATACCCAACAAG 605451 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 |||||||| || || | ||| | |||| ||| || || || |||| || || Sbjct 605452 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCRATTTCAACAGCTTCTGAAATGAT 605510 Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 ||| | | | | || | | | | | || || |||| |||||| || | Sbjct 605511 TCTYTCAACAATCTTTGGATCTGGCTTGTT-CTTCAAGTGRGAGAACAACAAACAGGCAA 605569 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || ||| | ||| |||||||| | || | |||||||| || || | || |||| Sbjct 605570 AGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAACCAGGCA 605629 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | | || ||| || | ||| || || | ||| |||||||| || ||||||| || | Sbjct 605630 TCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCCGGAGAAGAAGACACCCT 605689 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCA-C 33486 | || ||||| || |||| ||||| || || | |||| |||| || ||||| | Sbjct 605690 CAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTCCTTGTCTTGGATCCATC 605749 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || ||||| |||||||| | || | ||| || |||||||||||||| || | Sbjct 605750 TGATG-GCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAG 605808 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 | | ||||| ||| || || | || || || | ||| | || |||| || Sbjct 605809 AATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACAATAAGGAGTAGGTTTCTGAG 605868 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 || |||||||| || || || || || |||||||| | || || | ||| || || Sbjct 605869 TGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACTTGGCTTCTGGAATTTGRACY 605928 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | | || ||| |||| || || || || || || ||| ||| ||||| || Sbjct 605929 TCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATACCATCAGAGGCAGCAAAGAAG 605988 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 33783 ||||| || ||||| || |||||| | | | | || ||||| |||| Sbjct 605989 GCCAAMACTCTRGAAATAAAGAATCTTTCGTTTTCATTCATTCTGTTGTTCCAGTCATGT 606048 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | ||| || || | ||| | |||||| ||||||| || || || || || | ||||| Sbjct 606049 AAATCCTTGGACAAATCAATTTCTTCAGCTGTCCAGAAAGAAGCTTCGGCTCTCTTATAR 606108 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 | ||| || ||| | | ||||||||| | |||||||| Sbjct 606109 GCTTCCCAAATTTCAGGGAACTTGATTGGGAACAAGACAAATCT 606152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947067623720