Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq16 105 6e-18 seq14 93.3 4e-14 seq1 89.7 5e-13 >seq16 Length=958289 Score = 105 bits (116), Expect = 6e-18 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 ||||| | ||||||| | ||||| ||||||||||| || || | |||||| | ||| | Sbjct 204159 TCAAATATAATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTT 204218 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 ||||| | ||| |||| || || || || || || || ||||| || || Sbjct 204219 GAATCTAGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCA 204278 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 || |||||||||||| | || | | || || ||| | ||||| | ||||| | | Sbjct 204279 CCTGATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCT 204338 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| ||||| ||||| || ||||| | || ||||| | ||||| || Sbjct 204339 GACTACAACATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGG 204394 >seq14 Length=450723 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||||||||||| | || |||||||| ||||||| || | || || | || | |||| Sbjct 422321 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 422262 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | || ||||||| || || || || ||||||||||| || || || | Sbjct 422261 CTTCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTG 422202 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GAC 26942 | ||||||||| | || | || || || ||| | ||||| | ||| ||| | | | ||| Sbjct 422201 AGCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAG-AACTTTATCTGAC 422143 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||| ||||| || | ||| | ||| ||||| | ||||| || Sbjct 422142 TACAACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090 >seq1 Length=232064 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 ||||| || || ||||| || || | || || | ||| | ||||| | ||| |||||| Sbjct 90567 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 90626 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || ||||| ||||| ||||| ||||| || || || |||||||||||| | Sbjct 90627 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90686 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||||| |||| | || || ||||| ||||| Sbjct 90687 ATCTTCTCTGGTAAGCAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAAG 90746 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || | ||| | ||||| ||| | ||||| || Sbjct 90747 GAATCAACATTGCATTTAGTCCTAAGATTAAGAGGTGG 90784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662298284240