Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq16 105 6e-18
seq14 93.3 4e-14
seq1 89.7 5e-13
>seq16
Length=958289
Score = 105 bits (116), Expect = 6e-18
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819
||||| | ||||||| | ||||| ||||||||||| || || | |||||| | ||| |
Sbjct 204159 TCAAATATAATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTT 204218
Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879
||||| | ||| |||| || || || || || || || ||||| || ||
Sbjct 204219 GAATCTAGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCA 204278
Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939
|| |||||||||||| | || | | || || ||| | ||||| | ||||| | |
Sbjct 204279 CCTGATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCT 204338
Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||| ||||| ||||| || ||||| | || ||||| | ||||| ||
Sbjct 204339 GACTACAACATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGG 204394
>seq14
Length=450723
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823
||||||||||| | || |||||||| ||||||| || | || || | || | ||||
Sbjct 422321 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 422262
Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883
| || ||||||| || || || || ||||||||||| || || || |
Sbjct 422261 CTTCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTG 422202
Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GAC 26942
| ||||||||| | || | || || || ||| | ||||| | ||| ||| | | | |||
Sbjct 422201 AGCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAG-AACTTTATCTGAC 422143
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| ||||| ||||| || | ||| | ||| ||||| | ||||| ||
Sbjct 422142 TACAACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090
>seq1
Length=232064
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| || || ||||| || || | || || | ||| | ||||| | ||| ||||||
Sbjct 90567 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 90626
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| ||||| ||||| ||||| ||||| || || || |||||||||||| |
Sbjct 90627 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90686
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||||| |||| | || || ||||| |||||
Sbjct 90687 ATCTTCTCTGGTAAGCAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAAG 90746
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || | ||| | ||||| ||| | ||||| ||
Sbjct 90747 GAATCAACATTGCATTTAGTCCTAAGATTAAGAGGTGG 90784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662298284240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |