Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11 145 2e-29 seq17 95.1 3e-14 >seq11 Length=1501259 Score = 145 bits (160), Expect = 2e-29 Identities = 595/929 (64%), Gaps = 12/929 (1%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| |||| | ||| || |||| ||||| ||| | || |||||| | ||||| Sbjct 716905 AAGACCTTGGAAAGATCTTATCTATTGAAGATCAACGGTAAGATCGTTGAAAGACCGCAA 716964 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || || | ||| | |||||| ||||||| || | | | || | |||||| Sbjct 716965 CACTTGATCATGAGAGTTGCTGTTGGTATTCACGGTGAAAACATCGACAAAGTCATTGAA 717024 Query 363520 ACATATAAGCTTCTAAGTGCTCGTGTAT---TCACGCACGCCACGCCAACAATGTACAAT 363576 || || || ||| | || ||| || |||| |||||| | ||||| ||| |||| Sbjct 717025 ACTTACAA-CTTG-ATGT-CTCAAAGATACTTCACCCACGCCTCTCCAACTTTGTTCAAT 717081 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTC 363635 || || |||| | || || ||||| ||||| |||||| || |||||||||||| || Sbjct 717082 GCCGGTACTCCAAGACCTCAAATGTCCTCTTG-TTTCTTGGTATCAATGAAGGACGACTC 717140 Query 363636 CATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGG 363695 ||| || ||||||| ||||| | ||| | ||||||| || ||||||| ||| || || Sbjct 717141 CATTGACGGTATCTACGACACCTTGAAGGAATGTGCTCAAATCTCCAAGACTGCTGGTGG 717200 Query 363696 AATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGCGGCACAGGGG 363754 |||||| | |||||||| | | | ||| | ||||||| || || | Sbjct 717201 TATTGGTTTGCACATCCACAACATCAGATCCACTG-GTTCTTACATTGCAGGTACCAACG 717259 Query 363755 GATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 | ||| || ||||| || |||| ||| | | || || |||| || || || || || Sbjct 717260 G-TACTTCCAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAACACCGCCAGATATGTT 717318 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 || || ||||| ||| | ||| || ||||| |||| | || || || | Sbjct 717319 GATCAAGGTGGTAACAAGAGACCAGGTGCCTTTGCCTTGTACTTGGAACCATGGCACTCA 717378 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 ||||| ||||| || |||| || | || ||| || ||||| ||| | | || | Sbjct 717379 GATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAAGAAGAAATCAGAGCCAGA 717438 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG 363993 || | ||| || |||||| || | || || |||||| | || |||| | Sbjct 717439 GAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAAGAGAGTCAAGGCCAATGCT 717498 Query 363994 AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGAC 364053 ||||| | | || | || ||| ||||||| | |||| | ||||| || Sbjct 717499 GATTGGACCTTGTTCTCTCCTAGTGAAGCTCCAGGTTTGAGTGATGCTTATGGTGATGAA 717558 Query 364054 TATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCA 364113 | | || || || | ||||| | ||| || | | | ||||| || || Sbjct 717559 TTCGAAAAGCTTTATGATCAATATGAGTTGGAAGGWAGAGGWAGAAAGACCATCAAGGCC 717618 Query 364114 CAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTG 364173 || ||| | |||| |||||| | || | || | ||| || || || || | || | Sbjct 717619 CAAAAGTTGTGGTACGCCATCTTAGAAGCYCAAACTGAAACTGGTACTCCATTCATTGTT 717678 Query 364174 TACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC 364233 ||||| ||||| || ||| ||||||||||| || || | ||||| || | | Sbjct 717679 TACAAGGATTCCTGTAACAAGAAGTCCAACCAAAAGAACTTGGGTACCATCAARTCCTCC 717738 Query 364234 AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTT 364293 ||| | ||| || ||| |||||||| | | | | || ||||| || |||||| | Sbjct 717739 AACTTGTGTTGTGAAATTGTTGAATACTCTGATGAMAAKGAAACTGCTGTYTGTAACTTG 717798 Query 364294 GCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322 || || | || | || || ||||| || Sbjct 717799 GCYTCTGTTGCCTTGCCAGCCTTTGTCAA 717827 >seq17 Length=1055512 Score = 95.1 bits (104), Expect = 3e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGAC 111479 || ||||| |||||||| ||||| || ||||| | ||||||||| |||| | ||| Sbjct 816605 GTTAAAATCTGGGATGGTAATGGTTCCCGTGAGTATCTAGATTCTCTTGGATTGACCGAT 816664 Query 111480 AACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGAC 111539 | || ||||| ||||| || ||||| ||||| || |||||| | ||||||||||| || Sbjct 816665 AGAGAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGAG 816724 Query 111540 TA 111541 || Sbjct 816725 TA 816726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353316113294