Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq11 145 2e-29
seq17 95.1 3e-14
>seq11
Length=1501259
Score = 145 bits (160), Expect = 2e-29
Identities = 595/929 (64%), Gaps = 12/929 (1%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
||||| |||| | ||| || |||| ||||| ||| | || |||||| | |||||
Sbjct 716905 AAGACCTTGGAAAGATCTTATCTATTGAAGATCAACGGTAAGATCGTTGAAAGACCGCAA 716964
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|| || | ||| | |||||| ||||||| || | | | || | ||||||
Sbjct 716965 CACTTGATCATGAGAGTTGCTGTTGGTATTCACGGTGAAAACATCGACAAAGTCATTGAA 717024
Query 363520 ACATATAAGCTTCTAAGTGCTCGTGTAT---TCACGCACGCCACGCCAACAATGTACAAT 363576
|| || || ||| | || ||| || |||| |||||| | ||||| ||| ||||
Sbjct 717025 ACTTACAA-CTTG-ATGT-CTCAAAGATACTTCACCCACGCCTCTCCAACTTTGTTCAAT 717081
Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTC 363635
|| || |||| | || || ||||| ||||| |||||| || |||||||||||| ||
Sbjct 717082 GCCGGTACTCCAAGACCTCAAATGTCCTCTTG-TTTCTTGGTATCAATGAAGGACGACTC 717140
Query 363636 CATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGG 363695
||| || ||||||| ||||| | ||| | ||||||| || ||||||| ||| || ||
Sbjct 717141 CATTGACGGTATCTACGACACCTTGAAGGAATGTGCTCAAATCTCCAAGACTGCTGGTGG 717200
Query 363696 AATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGCGGCACAGGGG 363754
|||||| | |||||||| | | | ||| | ||||||| || || |
Sbjct 717201 TATTGGTTTGCACATCCACAACATCAGATCCACTG-GTTCTTACATTGCAGGTACCAACG 717259
Query 363755 GATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813
| ||| || ||||| || |||| ||| | | || || |||| || || || || ||
Sbjct 717260 G-TACTTCCAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAACACCGCCAGATATGTT 717318
Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873
|| || ||||| ||| | ||| || ||||| |||| | || || || |
Sbjct 717319 GATCAAGGTGGTAACAAGAGACCAGGTGCCTTTGCCTTGTACTTGGAACCATGGCACTCA 717378
Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933
||||| ||||| || |||| || | || ||| || ||||| ||| | | || |
Sbjct 717379 GATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAAGAAGAAATCAGAGCCAGA 717438
Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG 363993
|| | ||| || |||||| || | || || |||||| | || |||| |
Sbjct 717439 GAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAAGAGAGTCAAGGCCAATGCT 717498
Query 363994 AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGAC 364053
||||| | | || | || ||| ||||||| | |||| | ||||| ||
Sbjct 717499 GATTGGACCTTGTTCTCTCCTAGTGAAGCTCCAGGTTTGAGTGATGCTTATGGTGATGAA 717558
Query 364054 TATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCA 364113
| | || || || | ||||| | ||| || | | | ||||| || ||
Sbjct 717559 TTCGAAAAGCTTTATGATCAATATGAGTTGGAAGGWAGAGGWAGAAAGACCATCAAGGCC 717618
Query 364114 CAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTG 364173
|| ||| | |||| |||||| | || | || | ||| || || || || | || |
Sbjct 717619 CAAAAGTTGTGGTACGCCATCTTAGAAGCYCAAACTGAAACTGGTACTCCATTCATTGTT 717678
Query 364174 TACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC 364233
||||| ||||| || ||| ||||||||||| || || | ||||| || | |
Sbjct 717679 TACAAGGATTCCTGTAACAAGAAGTCCAACCAAAAGAACTTGGGTACCATCAARTCCTCC 717738
Query 364234 AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTT 364293
||| | ||| || ||| |||||||| | | | | || ||||| || |||||| |
Sbjct 717739 AACTTGTGTTGTGAAATTGTTGAATACTCTGATGAMAAKGAAACTGCTGTYTGTAACTTG 717798
Query 364294 GCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322
|| || | || | || || ||||| ||
Sbjct 717799 GCYTCTGTTGCCTTGCCAGCCTTTGTCAA 717827
>seq17
Length=1055512
Score = 95.1 bits (104), Expect = 3e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGAC 111479
|| ||||| |||||||| ||||| || ||||| | ||||||||| |||| | |||
Sbjct 816605 GTTAAAATCTGGGATGGTAATGGTTCCCGTGAGTATCTAGATTCTCTTGGATTGACCGAT 816664
Query 111480 AACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGAC 111539
| || ||||| ||||| || ||||| ||||| || |||||| | ||||||||||| ||
Sbjct 816665 AGAGAGGAAGGCGATCTGGGCCCAGTCTACGGGTTCCAATGGAGACACTTTGGTGCTGAG 816724
Query 111540 TA 111541
||
Sbjct 816725 TA 816726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |