Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq16 104 2e-17
seq14 98.7 9e-16
>seq16
Length=958289
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 23983 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042
|||| | ||||||| | ||||| ||||||||||| || || | || ||| | ||||| |
Sbjct 204160 CAAATATAATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTG 204219
Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102
| | | ||| |||| || || || || || || || ||||| || || |
Sbjct 204220 AATCTAGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCAC 204279
Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162
| |||||||| ||| |||| | | || |||||| | ||||| | |||| | | |
Sbjct 204280 CTGATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTG 204339
Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| || ||||| ||||| ||||| ||| | |||||||| || ||||| ||||| ||
Sbjct 204340 ACTACAACATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGG 204394
>seq14
Length=450723
Score = 98.7 bits (108), Expect = 9e-16
Identities = 163/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045
||||||||||| | || |||||||| ||||||| || | ||||| | || |||||
Sbjct 422321 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 422262
Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105
| || ||||||| || || || || ||||||||||| || || || |
Sbjct 422261 CTTCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTG 422202
Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GAT 24164
| ||||| ||| | || | || || |||||| | ||||| | || ||| | | | ||
Sbjct 422201 AGCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAG-AACTTTATCTGAC 422143
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| ||||| ||||| || | |||||||| || ||||| ||||| ||
Sbjct 422142 TACAACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935910922635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |