Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq14 122 8e-23 seq1 116 3e-21 seq16 114 1e-20 >seq14 Length=450723 Score = 122 bits (134), Expect = 8e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || ||||| ||| | || ||||| |||| || | || || || || || Sbjct 422317 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 422258 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||| | ||||| || || ||| |||||| ||||||||||| || |||||||| Sbjct 422257 TGATTCCATCGA--CATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 422200 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || || || || || ||||||||||| | | | ||| | || ||| Sbjct 422199 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTAC 422140 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| |||||||| || |||||||| | || ||||||| || Sbjct 422139 AACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090 >seq1 Length=232064 Score = 116 bits (128), Expect = 3e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||| || |||||||| |||| || | ||||| || || | || || ||| Sbjct 90567 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 90626 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | | ||| || ||| ||||| ||||| ||||||||||| ||||| | | Sbjct 90627 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90686 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187 || || | || || ||||||||||||| | ||| || || ||||| || ||||| Sbjct 90687 ATCTTCTCTGGTAAGCAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAAG 90746 Query 25188 GAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || | |||||||| ||||| ||||||| || Sbjct 90747 GAATCAACATTGCATTTAGTCCTAAGATTAAGAGGTGG 90784 >seq16 Length=958289 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || || || |||||||| ||||||| | ||||| || || Sbjct 204167 AATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTGAATCTAG 204226 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||| | || || | | ||| |||||| || || ||||| ||||||||||| || Sbjct 204227 TGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCTGATCA 204286 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || ||||| || || ||||| ||||| | | | || | || ||||| Sbjct 204287 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAA 204346 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || || |||||||| | || ||||||| || Sbjct 204347 CATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGG 204394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855