Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq16 143 2e-29
seq1 131 1e-25
seq14 120 3e-22
>seq16
Length=958289
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||||||||| ||||||||||| || |||| | ||||| ||| | |
Sbjct 204168 ATGCAAATTTTTGTTAAAACATTAACCGGTAAGACCATCACCTTAGAAGTTGAATCTAGT 204227
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | | || ||||| ||||| ||||| ||||||||||| ||||||
Sbjct 204228 GACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAA 204287
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || || | ||| | || || ||||||
Sbjct 204288 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAAC 204347
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTT 22447
|| ||||| ||||| || | |||||||||||| |||| | || ||||
Sbjct 204348 ATCCAAAAGGAATCAACACTCCATTTAGTTTTGAGATTAAGAGGTGGTT 204396
>seq1
Length=232064
Score = 131 bits (144), Expect = 1e-25
Identities = 149/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || ||||||||||| || | ||| | ||||| ||| | ||||| ||| |
Sbjct 90566 TTTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCAT 90625
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
|||| | |||| || || ||||||||||| ||||||||||| ||||||||| | |
Sbjct 90626 CGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 90685
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || | || || || ||||| ||| | | || | || || |||||||| |||||
Sbjct 90686 AATCTTCTCTGGTAAGCAATTAGAAGATGGCAGAACTTTGTCTGAYTACAACATCCAAAA 90745
Query 22407 AGAATCCACCATACATTTAGT 22427
||||| || | ||||||||
Sbjct 90746 GGAATCAACATTGCATTTAGT 90766
>seq14
Length=450723
Score = 120 bits (132), Expect = 3e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || |||||| |||| ||||| || | ||| | || || ||| |
Sbjct 422319 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 422260
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||| || | ||| | | || ||||| |||||||| || ||||| ||||| ||
Sbjct 422259 TCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 422200
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || || ||||| || | || | || || |||
Sbjct 422199 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTAC 422140
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||| ||||| ||||||||| | |||||||| ||| ||||
Sbjct 422139 AACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATT 422099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727913037605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |