Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 170 4e-37 seq14 149 1e-30 seq16 141 2e-28 >seq1 Length=232064 Score = 170 bits (188), Expect = 4e-37 Identities = 150/188 (80%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || ||||||||||| || || || | || || ||||||||||| ||||| || Sbjct 90754 GTTGATTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCCATCTTCTAATTGCTTACCA 90695 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 | ||| || | ||||||||| || |||||||| |||||||||||||| ||||| |||||| Sbjct 90694 GAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTG 90635 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || |||||||| || | ||||| |||||||| || ||||| || || || | |||| Sbjct 90634 ACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTC 90575 Query 68445 TTGACGAA 68452 ||||| || Sbjct 90574 TTGACAAA 90567 >seq14 Length=450723 Score = 149 bits (164), Expect = 1e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || || || ||||| || ||||||||||| || || || | || || || || Sbjct 422104 CAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTC 422163 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || ||||| || | ||||||||| || ||||| || ||||| ||||| Sbjct 422164 TTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTC 422223 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || ||||| || ||||||| || | ||||| || ||||| || ||||| Sbjct 422224 TTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAAAGTAATGGT 422283 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || || || || ||||| || |||||| || Sbjct 422284 CTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTG 422320 >seq16 Length=958289 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || || || || || || ||||||||||| || || || | || || || || Sbjct 204380 CAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTC 204321 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | ||||||||| || |||||||| |||||||| || Sbjct 204320 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATC 204261 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | ||| || || || |||| ||| ||||| ||||| ||||||||||| Sbjct 204260 TTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATGGT 204201 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || || || | || || || || || |||||||| Sbjct 204200 CTTACCGGTTAATGTTTTAACAAAAATTTGCATTAT 204165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622204155240