Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 4e-37
seq14 149 1e-30
seq16 141 2e-28
>seq1
Length=232064
Score = 170 bits (188), Expect = 4e-37
Identities = 150/188 (80%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
|| || || ||||||||||| || || || | || || ||||||||||| ||||| ||
Sbjct 90754 GTTGATTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCCATCTTCTAATTGCTTACCA 90695
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
| ||| || | ||||||||| || |||||||| |||||||||||||| ||||| ||||||
Sbjct 90694 GAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTG 90635
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| || |||||||| || | ||||| |||||||| || ||||| || || || | ||||
Sbjct 90634 ACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTC 90575
Query 68445 TTGACGAA 68452
||||| ||
Sbjct 90574 TTGACAAA 90567
>seq14
Length=450723
Score = 149 bits (164), Expect = 1e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || || || ||||| || ||||||||||| || || || | || || || ||
Sbjct 422104 CAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTC 422163
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || ||||| || | ||||||||| || ||||| || ||||| |||||
Sbjct 422164 TTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTC 422223
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || ||||| || ||||||| || | ||||| || ||||| || |||||
Sbjct 422224 TTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAAAGTAATGGT 422283
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || || || || ||||| || |||||| ||
Sbjct 422284 CTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTG 422320
>seq16
Length=958289
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || || || || || || ||||||||||| || || || | || || || ||
Sbjct 204380 CAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTC 204321
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | ||||||||| || |||||||| |||||||| ||
Sbjct 204320 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTATC 204261
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | ||| || || || |||| ||| ||||| ||||| |||||||||||
Sbjct 204260 TTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATGGT 204201
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464
|| || || | || || || || || ||||||||
Sbjct 204200 CTTACCGGTTAATGTTTTAACAAAAATTTGCATTAT 204165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622204155240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |