Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 seq16 95.1 1e-14 >seq14 Length=450723 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || |||||| |||||||| | || ||||| ||||| |||||||| || Sbjct 422089 ACCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 422148 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| | | ||||| | ||| ||||||||| |||| | | ||||| || || || Sbjct 422149 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGG 422208 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGA 114333 || ||||||||||| || ||| | ||| | | || | || || | ||||||| Sbjct 422209 GATACCTTCTTTGTCTTGGAT-TTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGA 422267 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| || | || || || || ||||||||||| ||||| ||||| Sbjct 422268 CCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 422316 >seq16 Length=958289 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || ||||||||||||||| | || ||||| ||||| |||||||| || Sbjct 204395 ACCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGA 204336 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || | | ||||| | ||| |||||||| |||| | | ||||| || || || Sbjct 204335 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 204276 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG-TTCAACGGTGTCGGTGGATTCGA 114333 ||| ||||| || || || ||| | ||| | | |||| || ||| | ||||| | Sbjct 204275 AATACCTTCCTTATCTTGGAT-TTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAA 204217 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||| | || || ||||| | ||||| |||||||| ||||| Sbjct 204216 CTTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCAT 204168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134312953404