Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 113 9e-20 >seq2 Length=1277918 Score = 113 bits (124), Expect = 9e-20 Identities = 192/276 (70%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 ||||| ||||| || || || || |||||| | ||||| || ||||| ||| ||| Sbjct 605804 TTCAATGCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGGGCCATCAGATGG 605745 Query 42672 ATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGG 42730 ||| | || | | |||| ||| | || || ||||| || || | || || ||||| Sbjct 605744 ATCCA-AGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGG 605686 Query 42731 CATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCC 42790 |||||||||| || | || || | ||||||||| | ||| |||| | | |||||| Sbjct 605685 TGTCTTCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGAAAGGTTTGATGCC 605626 Query 42791 CGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGC 42850 || | |||||||| ||||| | ||| |||| ||||| || | || | |||||||| Sbjct 605625 TGGTTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTACACACTGACTTTGC 605566 Query 42851 CTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC 42886 ||| | ||||||| ||| | | | ||||||| Sbjct 605565 CTGTTTGTTGTTCTC---YCACTTGAAGAACAAGCC 605533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338999327920