Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq17 100 3e-16 >seq17 Length=1055512 Score = 100 bits (110), Expect = 3e-16 Identities = 271/412 (66%), Gaps = 17/412 (4%) Strand=Plus/Minus Query 20189 TTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGG-GTCTAAGACCAGTAAC 20247 ||||||| || ||||| |||| ||||| || || || || ||| | | | | ||| Sbjct 817080 TTGTAGACATGAGCATCACCCATAGTGTGGATGAAGTCACCACAGTCCATGTCAAC-AAC 817022 Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307 | ||||| ||| | || | | || ||| |||||||| || ||||| ||||| || Sbjct 817021 CTTAGCAATCATTTTGGTCAGCAAGGCATATGAAGCAATGTTGAATGGAACACCCAATCC 816962 Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAA------GCTCACCGT---CAGCTA- 20357 |||||| | || || || || || ||| || | ||| || ||| | Sbjct 816961 CATGTCGCATGATCTTTGGTAAAGAATACATGATAATTGAGGCTTTTGGTTTTCAGGGAA 816902 Query 20358 -----CATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412 | || || || || || | ||| || || ||||| ||||| | ||||| | Sbjct 816901 TGACACGTAGAACTGGCAAAAGACGTGGCATGGGGGAAGGGCCATTTTCTTGAAGTCTGG 816842 Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCAC 20472 |||||||||||| |||| ||||||||||| |||| || || | |||| | | Sbjct 816841 AGGGTTCCACGCAGACATGATGATTCTTCTGTCGTATGGGTTGGTCTTTAGCTTGTGGAT 816782 Query 20473 AATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGC 20532 || | || |||||| | |||| ||| || ||||| | | |||||| ||| | Sbjct 816781 GATCTCACTCAGTTGGTCGTATCCCTTGCCGGTGTAGTCTGTGTGGCAGTCCACATACTC 816722 Query 20533 CGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC 20584 || |||||||| ||||| ||||| ||||| || || |||| ||| || ||| Sbjct 816721 AGCACCAAAGTGTCTCCATTGGAACCCGTAGACTGGGCCCAGATCGCCTTCC 816670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372706208280