Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq14 113 1e-19 >seq14 Length=450723 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | |||||||||||||| || || ||||| Sbjct 422125 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAA 422184 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | ||||| | |||||| |||||||| || |||||||| || || || | Sbjct 422185 GATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTAACAAT 422244 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || ||||| ||||| || || | || || ||||| || || ||||| || || Sbjct 422245 GTCGATGGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 422304 Query 288462 GAATATCTGCATTATGT 288478 ||| || |||||| ||| Sbjct 422305 GAAAATTTGCATTTTGT 422321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654143056526