Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11 271 9e-68 >seq11 Length=1501259 Score = 271 bits (300), Expect = 9e-68 Identities = 832/1281 (65%), Gaps = 21/1281 (2%) Strand=Plus/Minus Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAA 114180 || ||||||||| ||||| ||||| || | | | || | || |||||||| || || Sbjct 718170 GACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCATAGGTACCTTCAACCTCAGCTAA 718111 Query 114181 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240 ||| | || || | || |||||||| || || ||||| || || |||| | Sbjct 718110 TTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTTTCAAAGATTTGAATGTTCAATTG 718051 Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300 |||||||| || || ||||| | | || ||| || || |||| || |||||||| Sbjct 718050 CTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACATCATGAARGCATCAGCAAGACCTTG 717991 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 114360 ||||| | ||||||| | |||||||| || || ||| ||| || || || || || Sbjct 717990 AACACCTAAAGCAATTGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTA 717931 Query 114361 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 114420 | || || || ||||| ||| | || |||| | || || || |||||||| Sbjct 717930 GTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGGCAATGACTTTACAGACATCATGAAG 717871 Query 114421 CTTTTCGTAATCAAAACTGCGAGTC------TCTTCA------TTGACATACTTAGGAAG 114468 ||||| | ||||| || | | ||| |||||| |||||| | || | Sbjct 717870 CTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTTCAGAAACCTTGACAAAGGCTGGCAA 717811 Query 114469 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 114528 ||| | || |||| ||||| |||| || || | | ||||| ||| || | |||||| Sbjct 717810 GGCAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCAGAGTATTCAACAATTTC 717751 Query 114529 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 114588 |||||| || || || ||||| |||||||||||||| || ||||| ||||||| Sbjct 717750 ACAACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGGTTGGACTTCTTGTTACA 717691 Query 114589 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 114648 | ||||||||||| ||| |||| || || || || ||||| | | | || || | Sbjct 717690 GGAATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTA 717631 Query 114649 CCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 114707 ||| || | | | || | | || | ||| || ||| ||| || | | Sbjct 717630 CCACAACTTTTGGGCCTTG-ATGGTCTTTCTWCCTCTWCCTTCCAACTCATATTGATCAT 717572 Query 114708 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 114767 | || ||| || || ||||| || || | ||||| || | | || ||| Sbjct 717571 AAAGCTTTTCGAATTCATCACCATAAGCATCACTCAAACCTGGAGCTTCACTAGGAGAGA 717512 Query 114768 AGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 | | | ||| | | || ||| || | ||||||||| | ||||| ||||| || | Sbjct 717511 ACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRG 717452 Query 114828 CTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886 ||| ||| | || | | | || |||||| | || || || | | || | Sbjct 717451 CTGGGAATAARTCTCTGGCTCTGA-TTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATG 717393 Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG 114945 || || | |||||| | |||||| ||||||| ||||| || | | ||| | | Sbjct 717392 AAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGTCTCTTG 717333 Query 114946 --ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATA 115003 |||| | || | ||||| || || ||| || || || | | ||| ||||| | | Sbjct 717332 TTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAA 717273 Query 115004 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATG 115063 |||| || || || || || ||| ||| | ||| ||||| | |||||| Sbjct 717272 CCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATG 717213 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 |||| ||||||||| || || ||| |||||||| || || ||| | | || ||||| Sbjct 717212 TGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAG 717153 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || ||||| || ||||| |||| ||| | | ||| || |||||||| || ||| Sbjct 717152 ATACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCTT 717093 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || ||||| || ||||| | ||||| | |||||| |||| | ||| |||||| Sbjct 717092 GGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAAG 717033 Query 115244 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 115303 | ||| || || | ||| | |||| ||| ||||||||||| | | || | ||| Sbjct 717032 TTGTAAGTTTCAATGACTTTGTCGATGTTTTCACCGTGAATACCAACAGCAACTCTCATG 716973 Query 115304 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCTC 115362 | || || ||| ||| |||| | | |||| | || | || || ||| |||| || Sbjct 716972 ATCAAGTGTTGCGGTCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATCTT-TC 716914 Query 115363 CAAGGTCTTGAGACCAAAATA 115383 ||||||||||| |||||| || Sbjct 716913 CAAGGTCTTGAAACCAAAGTA 716893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353473062360