Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 6e-13 >seq1 Length=232064 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | | || ||||||||||| |||||||| || ||||| |||| Sbjct 90785 ACCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGA 90726 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| | | || |||| |||||||||| ||| || | || || || || | ||| Sbjct 90725 CAAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGG 90666 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTG--AGCGTCGCCACCGTGTCGCTCGATTCC 42158 | | |||||||| ||| || ||| ||||||| | || ||| | ||||| Sbjct 90665 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCG--ATGGTTTCGGTAGATTCG 90608 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199 || || | || ||||| || || |||| ||||| ||||| Sbjct 90607 ACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 90567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212684567280