Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 105 7e-18 >seq11 Length=1501259 Score = 105 bits (116), Expect = 7e-18 Identities = 274/419 (65%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || ||||||| || || || || || || ||||| || |||||| || Sbjct 717061 GCCTCTCCAACTTTGTTCAATGCCGGTACTCCAAGACCTCAAATGTCCTCTTGTTTCTTG 717120 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | |||| ||||||||| ||| || | ||||| | | ||||| ||||| Sbjct 717121 GTATCAATGAAGGACGACTCCATTGACGGTATCTACGACACCTTGAAGGAATGTGCTCAA 717180 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || || || | ||||| || | | ||| ||||| Sbjct 717181 ATCTCCAAGACTGCTGGTGGTATTGGTTTGCACATCCACAACATCAGATCCACTGGTTCT 717240 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| |||||||| || || ||||| || | | |||||| || | ||||||||| Sbjct 717241 TACATTGCAGGTACCAACGGTACTTCCAATGGTTTGATTCCTATGGTCAGAGTCTTCAAC 717300 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || | || || || || |||||| | ||| ||| | || || | || Sbjct 717301 AACACCGCCAGATATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCCTTTGCCTTGTAC 717360 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | || || |||||| | || | | |||||| ||| | ||||||||||||| || Sbjct 717361 TTGGAACCATGGCACTCAGATATCTTTGATTTCATTGACATCAGAAAGAACCACGGTAAA 717420 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || |||||||| | ||| || || ||| | ||||| | || ||||| Sbjct 717421 GAAGAAATCAGAGCCAGAGAYTTATTCCCAGCYCTTTGGATTCCAGATTTGTTCATGAA 717479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723094871320