Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq14 145 5e-30
seq16 138 8e-28
seq1 109 4e-19
>seq14
Length=450723
Score = 145 bits (160), Expect = 5e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| || |||||||| ||||| || || ||||| |||||||| ||
Sbjct 422090 CCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 422149
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| ||||||||||||| || |||||| | || || | ||||| || |||
Sbjct 422150 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 422209
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| ||||| || ||||| || || | ||| | ||| ||
Sbjct 422210 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACC 422269
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| || |||||||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 422270 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319
>seq16
Length=958289
Score = 138 bits (152), Expect = 8e-28
Identities = 182/250 (73%), Gaps = 5/250 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| ||||| ||||||||||| || || || || ||||| |||||||| || | |
Sbjct 204394 CCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGAT 204335
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| |||| ||||||| ||||| || ||||| | ||||| | ||||| || |||
Sbjct 204334 AAGG-TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 204276
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||| |||||||| || ||||| || ||| || || | || ||| ||| ||
Sbjct 204275 AATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAAC 204216
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGC---ATATTTGAAAT 15185
|||||||| ||||| ||||| || | ||||| |||||||||||| |||||||| ||
Sbjct 204215 TTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATATTTGATAT 204156
Query 15186 AAATTTTTTA 15195
|| || ||
Sbjct 204155 TTATWTTGTA 204146
>seq1
Length=232064
Score = 109 bits (120), Expect = 4e-19
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||||| |||||||| | || || || ||||| |||||||| ||
Sbjct 90784 CCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGAC 90725
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||||||||| || |||| | | || || | ||||| || ||||
Sbjct 90724 AAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGA 90665
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| || ||| || || || ||| || ||| ||
Sbjct 90664 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACT 90605
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
|| || |||||||| ||||| || | || || ||||||
Sbjct 90604 TCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAAA 90566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391925952845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |