Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq14 145 5e-30 seq16 138 8e-28 seq1 109 4e-19 >seq14 Length=450723 Score = 145 bits (160), Expect = 5e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| || |||||||| ||||| || || ||||| |||||||| || Sbjct 422090 CCACCTCTTAATCTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 422149 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| ||||||||||||| || |||||| | || || | ||||| || ||| Sbjct 422150 AAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 422209 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||| || ||||| || || | ||| | ||| || Sbjct 422210 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACC 422269 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || |||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 422270 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 422319 >seq16 Length=958289 Score = 138 bits (152), Expect = 8e-28 Identities = 182/250 (73%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| ||||| ||||||||||| || || || || ||||| |||||||| || | | Sbjct 204394 CCACCTCTTAATCTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGAT 204335 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| ||||||| ||||| || ||||| | ||||| | ||||| || ||| Sbjct 204334 AAGG-TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 204276 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| |||||||| || ||||| || ||| || || | || ||| ||| || Sbjct 204275 AATACCTTCCTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAAC 204216 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGC---ATATTTGAAAT 15185 |||||||| ||||| ||||| || | ||||| |||||||||||| |||||||| || Sbjct 204215 TTCTAAGGTGATGGTCTTACCGGTTAATGTTTTAACAAAAATTTGCATTATATTTGATAT 204156 Query 15186 AAATTTTTTA 15195 || || || Sbjct 204155 TTATWTTGTA 204146 >seq1 Length=232064 Score = 109 bits (120), Expect = 4e-19 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||||| |||||||| | || || || ||||| |||||||| || Sbjct 90784 CCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGAC 90725 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||||||||| || |||| | | || || | ||||| || |||| Sbjct 90724 AAAGTTCTGCCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGA 90665 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || ||| || ||| || || || ||| || ||| || Sbjct 90664 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACT 90605 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168 || || |||||||| ||||| || | || || |||||| Sbjct 90604 TCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAAA 90566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391925952845