Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq16 127 2e-24
seq14 122 8e-23
seq1 107 2e-18
>seq16
Length=958289
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| || ||||||||||||||||| || || || | |||| ||
Sbjct 204382 CTCAAAACTAAATGGAGTGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCG 204323
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| || || || ||||| ||||| |||
Sbjct 204322 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTA 204263
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| || | || || | || ||| ||| || ||||| | || |
Sbjct 204262 TCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTAGATTCAACTTCTAAGGTGATG 204203
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| ||||||||||||||
Sbjct 204202 GTCTTACCGGTTAATGTTTTAACAAAAATTTGCAT 204168
>seq14
Length=450723
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| |||||| || |||||||||||||| || || || | ||| ||
Sbjct 422102 CTCAAGACTAAATGCAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCG 422161
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || ||| | || |||| ||| || || || || || ||||||||
Sbjct 422162 TCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTG 422221
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| || | || | || || ||||| ||||| || | |||||
Sbjct 422222 TCTTGGATTTTAGCCTTAACAATGTCGATGGAATCAGAAGATTCGACCTCCAAAGTAATG 422281
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||||||||||||| |||||||||||
Sbjct 422282 GTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 422316
>seq1
Length=232064
Score = 107 bits (118), Expect = 2e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|||| ||||| ||||||||||||||||| || || || | ||| | ||| ||
Sbjct 90766 ACTAAATGCAATGTTGATTCCTTTTGGATGTTGTARTCAGACAAAGTTCTGCCATCTTCT 90707
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
||||| || || | | | || |||| ||| || || || ||||| ||||| || |||||
Sbjct 90706 AATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 90647
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || |||| || || | ||| |||| ||| |||||||| | ||||| || ||
Sbjct 90646 ATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAATGGTCTTA 90587
Query 45312 CCGGTTAGAGTTTTTACAAAA 45332
||||||| || || ||||||
Sbjct 90586 CCGGTTAAGGTCTTGACAAAA 90566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003103949320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |