Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq11 260 2e-64 >seq11 Length=1501259 Score = 260 bits (288), Expect = 2e-64 Identities = 831/1283 (65%), Gaps = 23/1283 (2%) Strand=Plus/Minus Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 || ||||||||| ||||| ||||| || | | |||| | || |||||||| || || Sbjct 718170 GACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCATAGGTACCTTCAACCTCAGCTAA 718111 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || |||||||| || || ||||| || || |||| | Sbjct 718110 TTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTTTCAAAGATTTGAATGTTCAATTG 718051 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 |||||||| || || ||||| | | | ||| || || |||| || |||||||| Sbjct 718050 CTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACATCATGAARGCATCAGCAAGACCTTG 717991 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||| || || ||| ||| || || || || || Sbjct 717990 AACACCTAAAGCAATTGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTA 717931 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 | || || || ||||| ||| | || |||| | || || || |||||||| Sbjct 717930 GTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGGCAATGACTTTACAGACATCATGAAG 717871 Query 116382 CTTTTCGTAATCAAAACTGCGAGTC------TCTTCA------TTGACATACTTAGGAAG 116429 ||||| | ||||| || | | ||| |||||| |||||| | || | Sbjct 717870 CTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTTCAGAAACCTTGACAAAGGCTGGCAA 717811 Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 ||| | || |||| ||||| |||| || || | | ||||| ||| || | |||||| Sbjct 717810 GGCAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCAGAGTATTCAACAATTTC 717751 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 |||||| || || || ||||| |||||||||||||| || ||||| ||||||| Sbjct 717750 ACAACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGGTTGGACTTCTTGTTACA 717691 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 | ||||||||| | || |||| || || || || ||||| | | | || || | Sbjct 717690 GGAATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTA 717631 Query 116610 CCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668 ||| || | | | || | | || | ||| || ||| ||| || | | Sbjct 717630 CCACAACTTTTGGGCCTTG-ATGGTCTTTCTWCCTCTWCCTTCCAACTCATATTGATCAT 717572 Query 116669 AGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 | || || || || ||||| ||| || | ||||| || | | ||| ||| Sbjct 717571 AAAGCTTTTCGAATTCATCACCATAAGCATCACTCAAACCTGGAGCTTCACTAGGAGAGA 717512 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 | | | ||| | | || ||| || | ||||||||| | ||||| ||||| || | Sbjct 717511 ACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRG 717452 Query 116789 CCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 | | ||| | || | | | || |||||| | || || || | | || | Sbjct 717451 CTGGGAATAARTCTCTGGCTCTGA-TTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATG 717393 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC-- 116905 || || | |||||| | |||||| ||||||| ||||| || | | | ||| | | Sbjct 717392 AAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGC-AAAGGCACCTGGTCTCTT 717334 Query 116906 --GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 |||| | || | ||||| || || || ||| || || | | ||| ||||| | Sbjct 717333 GTTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAA 717274 Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGAT 117023 ||||| || || || || || ||| ||| ||| ||||| | |||||| Sbjct 717273 ACCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGAT 717214 Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083 ||||| ||||||||| || || ||| |||||||| || || ||| | | || |||| Sbjct 717213 GTGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTA 717154 Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143 ||| || || || ||||| |||| ||| | | ||| || |||||||| || || Sbjct 717153 GATACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCT 717094 Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTT 117203 ||| ||||| || ||||| | ||||| | |||||| |||| | ||| |||||| Sbjct 717093 TGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAA 717034 Query 117204 ATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCAT 117263 | ||| || || | ||| | |||| ||| ||||||||||| | | || | ||| Sbjct 717033 GTTGTAAGTTTCAATGACTTTGTCGATGTTTTCACCGTGAATACCAACAGCAACTCTCAT 716974 Query 117264 AAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCT 117322 | || || ||| ||| |||| | | |||| | || | || || ||| |||| | Sbjct 716973 GATCAAGTGTTGCGGTCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATCTT-T 716915 Query 117323 CCAAGGTCTTGAGACCAAAATAG 117345 |||||||||||| |||||| ||| Sbjct 716914 CCAAGGTCTTGAAACCAAAGTAG 716892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507069629720