Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq11 260 2e-64
>seq11
Length=1501259
Score = 260 bits (288), Expect = 2e-64
Identities = 831/1283 (65%), Gaps = 23/1283 (2%)
Strand=Plus/Minus
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141
|| ||||||||| ||||| ||||| || | | |||| | || |||||||| || ||
Sbjct 718170 GACACCTTGGGAAGCTGGTGATCCTTCGTAAGAGGCATAGGTACCTTCAACCTCAGCTAA 718111
Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201
||| | || || | || |||||||| || || ||||| || || |||| |
Sbjct 718110 TTCCGTAGAAGCTTCTAAAGCAGCGTGATAGATAGTTTCAAAGATTTGAATGTTCAATTG 718051
Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261
|||||||| || || ||||| | | | ||| || || |||| || ||||||||
Sbjct 718050 CTTGGCCTTTTCAGAGTCAAATGGAACTCTCAACATCATGAARGCATCAGCAAGACCTTG 717991
Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321
||||| | ||||||| | |||||||| || || ||| ||| || || || || ||
Sbjct 717990 AACACCTAAAGCAATTGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTA 717931
Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381
| || || || ||||| ||| | || |||| | || || || ||||||||
Sbjct 717930 GTAGTTTCTGTCAATAACAGCATTCAAGTTCTTGGCAATGACTTTACAGACATCATGAAG 717871
Query 116382 CTTTTCGTAATCAAAACTGCGAGTC------TCTTCA------TTGACATACTTAGGAAG 116429
||||| | ||||| || | | ||| |||||| |||||| | || |
Sbjct 717870 CTTTTGGAAATCATAAGTTTGWGTCTTTTGGTCTTCAGAAACCTTGACAAAGGCTGGCAA 717811
Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489
||| | || |||| ||||| |||| || || | | ||||| ||| || | ||||||
Sbjct 717810 GGCAACAGARGCCAAGTTACARACAGCAGTTTCMTTKTCATCAGAGTATTCAACAATTTC 717751
Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549
|||||| || || || ||||| |||||||||||||| || ||||| |||||||
Sbjct 717750 ACAACACAAGTTGGAGGAYTTGATGGTACCCAAGTTCTTTTGGTTGGACTTCTTGTTACA 717691
Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609
| ||||||||| | || |||| || || || || ||||| | | | || || |
Sbjct 717690 GGAATCCTTGTAAACAATGAATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTA 717631
Query 116610 CCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668
||| || | | | || | | || | ||| || ||| ||| || | |
Sbjct 717630 CCACAACTTTTGGGCCTTG-ATGGTCTTTCTWCCTCTWCCTTCCAACTCATATTGATCAT 717572
Query 116669 AGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728
| || || || || ||||| ||| || | ||||| || | | ||| |||
Sbjct 717571 AAAGCTTTTCGAATTCATCACCATAAGCATCACTCAAACCTGGAGCTTCACTAGGAGAGA 717512
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
| | | ||| | | || ||| || | ||||||||| | ||||| ||||| || |
Sbjct 717511 ACAAGGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRG 717452
Query 116789 CCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847
| | ||| | || | | | || |||||| | || || || | | || |
Sbjct 717451 CTGGGAATAARTCTCTGGCTCTGA-TTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATG 717393
Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC-- 116905
|| || | |||||| | |||||| ||||||| ||||| || | | | ||| | |
Sbjct 717392 AAATCAAAGATATCTGAGTGCCATGGTTCCAAGTACAAGGC-AAAGGCACCTGGTCTCTT 717334
Query 116906 --GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963
|||| | || | ||||| || || || ||| || || | | ||| ||||| |
Sbjct 717333 GTTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAA 717274
Query 116964 ACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGAT 117023
||||| || || || || || ||| ||| ||| ||||| | ||||||
Sbjct 717273 ACCATTGGAAGTACCGTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGAT 717214
Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083
||||| ||||||||| || || ||| |||||||| || || ||| | | || ||||
Sbjct 717213 GTGCAAACCAATACCACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTA 717154
Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143
||| || || || ||||| |||| ||| | | ||| || |||||||| || ||
Sbjct 717153 GATACCGTCAATGGAGTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCT 717094
Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTT 117203
||| ||||| || ||||| | ||||| | |||||| |||| | ||| ||||||
Sbjct 717093 TGGAGTACCGGCATTGAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAA 717034
Query 117204 ATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCAT 117263
| ||| || || | ||| | |||| ||| ||||||||||| | | || | |||
Sbjct 717033 GTTGTAAGTTTCAATGACTTTGTCGATGTTTTCACCGTGAATACCAACAGCAACTCTCAT 716974
Query 117264 AAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCT 117322
| || || ||| ||| |||| | | |||| | || | || || ||| |||| |
Sbjct 716973 GATCAAGTGTTGCGGTCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATCTT-T 716915
Query 117323 CCAAGGTCTTGAGACCAAAATAG 117345
|||||||||||| |||||| |||
Sbjct 716914 CCAAGGTCTTGAAACCAAAGTAG 716892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507069629720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |