Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 113 5e-20 seq14 91.5 1e-13 >seq2 Length=1277918 Score = 113 bits (124), Expect = 5e-20 Identities = 293/444 (66%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||||| ||| || |||||||| || || || ||||| ||| | || | |||||| Sbjct 605553 GAACAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGA 605612 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| ||||| || ||||| | || || || | ||| || || || || || || Sbjct 605613 GAAGGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCC 605672 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064 || |||||||| ||||| || || |||||||| ||||| | || | ||| ||| || Sbjct 605673 GGAGAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTC 605732 Query 133065 TTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 ||| || | |||||| | | ||||||||||||||||| |||| || || |||| Sbjct 605733 CTTGTCTTG-GATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTT 605791 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCC-GAGGAAC--GCACGTAGGTGTCGATGA 133180 | ||||| || || || || || | |||| || | | ||| ||||| | | Sbjct 605792 CTATGGCATTGAATAA---GAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACA 605848 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || || |||| ||||| | ||| ||||| |||||| || || || || ||| Sbjct 605849 ATAAGGAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACT 605908 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 || || | || || || || |||| || |||| || || ||||| || | Sbjct 605909 TGGCTTCTGGAATTTGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATAC 605968 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCA 133324 | || ||| || || ||||||| Sbjct 605969 CATCAGAGGCAGCAAAGAAGGCCA 605992 >seq14 Length=450723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||||||||| || || || || ||||| || | || ||||| | Sbjct 422319 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 422260 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | | | |||| | ||||||| |||||||| || || || | || Sbjct 422259 TCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 422200 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | ||| || || || | || |||| | || | |||||| Sbjct 422199 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTAC 422140 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || |||||||| || || | || ||||| || Sbjct 422139 AACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172693713280