Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 5e-20
seq14 91.5 1e-13
>seq2
Length=1277918
Score = 113 bits (124), Expect = 5e-20
Identities = 293/444 (66%), Gaps = 8/444 (2%)
Strand=Plus/Plus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| ||| || |||||||| || || || ||||| ||| | || | ||||||
Sbjct 605553 GAACAACAAACAGGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAGATCAACTCGTTGGA 605612
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| ||||| || ||||| | || || || | ||| || || || || || ||
Sbjct 605613 GAAGGTCAAACCAGGCATCAAACCTTTCTTCTTYAACCAGAAGATAGCAGCAAATGATCC 605672
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064
|| |||||||| ||||| || || |||||||| ||||| | || | ||| ||| ||
Sbjct 605673 GGAGAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCAGCAAACAGGGCGTC 605732
Query 133065 TTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123
||| || | |||||| | | ||||||||||||||||| |||| || || ||||
Sbjct 605733 CTTGTCTTG-GATCCATCTGATGGCCCATTCGGCCTTTTCCTTGATTTCAGGAATGGTTT 605791
Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCC-GAGGAAC--GCACGTAGGTGTCGATGA 133180
| ||||| || || || || || | |||| || | | ||| ||||| | |
Sbjct 605792 CTATGGCATTGAATAA---GAATTCGTTTTCCTTAGKGTCCTTGATGTATGTGTCCAACA 605848
Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240
|| || |||| ||||| | ||| ||||| |||||| || || || || |||
Sbjct 605849 ATAAGGAGTAGGTTTCTGAGTGGATGTTTTCCATCATGATTTGGAAACCRTAGAAACACT 605908
Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300
|| || | || || || || |||| || |||| || || ||||| || |
Sbjct 605909 TGGCTTCTGGAATTTGRACYTCAGCAGAGAAATTTTCAACCAAGTTCTCRTTGACAATAC 605968
Query 133301 CGTCGCTGGCGGCGAAAAAGGCCA 133324
| || ||| || || |||||||
Sbjct 605969 CATCAGAGGCAGCAAAGAAGGCCA 605992
>seq14
Length=450723
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
||||||||||| ||||||||||| || || || || ||||| || | || ||||| |
Sbjct 422319 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 422260
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | | | |||| | ||||||| |||||||| || || || | ||
Sbjct 422259 TCTGATTCCATCGACATTGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 422200
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| | | || | ||| || || || | || |||| | || | ||||||
Sbjct 422199 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGACTAC 422140
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||| | || |||||||| || || | || ||||| ||
Sbjct 422139 AACATCCAAAAGGAATCCACCCTGCATTTAGTCTTGAGATTAAGAGGTGG 422090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172693713280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |